Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03427 ATGTCACAAAACGACCGCCCGGAGGCGCCGTCCCCGGCGACAGCCGCAAACGGCTCCGCGGCGGCGAAGGCGGAGAATCCAGCTGCGAGGGCGTTGGTTTCTTCGAGCTTGAGGCTGAGGCCGAATCCGAACAAGGAGCACAAAGCGGAGGAGTACGAAGACTTGCAATTGGAGTACTGCCCAGCGGTTTTCACCGCGCTGGAGAGGTACCTTCCGCCGAACATGCTCAATGTTCGTCGCGAACACAAGGCCAAGTTCATGCACGACATTCTAGCCAAGTATATGCCCCGCGCAGAGCAGACCAGAATACAAAAGCTAAGAGCATACAGACTGAGGATAATAGCAAATTATCGGCCTCGTTTCCGAGAATTGTATACTCTGAATCCTACGGCATTCTTTGTCCCAGCATTTCTGAATGCAATTAATGAAAATACAGAACAAAGCTTTAGAAGGATAATATCCGAGCCTTCTCCAGGCATCTTTATATTTCAAATGCTACAACCACGCATTTGTGAGTTATTCCTCTCCGAGATTGAAAATGTTGAGAAGTTTGTAGCTGAAACAAAATTCCGTATCATGCGTCCGAATATCATGAATAAGTATGGCGTTGTGCTTGATGACTTTGGCTTTGGACCAATGCTTGAGAAACTTATGGAAGGTTTTATTCGACCACTGTCTCGAGTCTTGTTTCCCGAAATTGGATCATCGCTGGATTCTCATCATGGATTTGTTGTTGAATATGGTAAAGATAAAGCTGTTGACATGGGTTTTCATGTCGATGACTCAGAAGTAACCTTAAATGTTTGCCTGGGCAAGGAATTTTCTGGAGGGGAATTGTATTTTCAGGGCACAAGATGTGAGAAACATGTAAATACATCAACCTATACAGAGGAGTACTTTGACTATTCCCATAAACCTGGACGAGCTGTGCTTCATCGAGGTCGCCATCGCCGTGGTGCCAAAGCTACAACATCTGGCCATCGTGTCAACCTACTTCTGTGGTGCAGAAGCTCTGTCTTTAGAGAGGTGAAAAGGTATCAAACCGATTGCTCCAGCTGGTGTGGGGAGTGCAGTAAAGTGAAAAGGGAAATGCAGTGCTCCCGGGTCACATCTACCAAATCGGAGTTGCTTGCAAAGGAAGGCGAATCCACTTCGAAATGA 1161 0.4694 MSQNDRPEAPSPATAANGSAAAKAENPAARALVSSSLRLRPNPNKEHKAEEYEDLQLEYCPAVFTALERYLPPNMLNVRREHKAKFMHDILAKYMPRAEQTRIQKLRAYRLRIIANYRPRFRELYTLNPTAFFVPAFLNAINENTEQSFRRIISEPSPGIFIFQMLQPRICELFLSEIENVEKFVAETKFRIMRPNIMNKYGVVLDDFGFGPMLEKLMEGFIRPLSRVLFPEIGSSLDSHHGFVVEYGKDKAVDMGFHVDDSEVTLNVCLGKEFSGGELYFQGTRCEKHVNTSTYTEEYFDYSHKPGRAVLHRGRHRRGAKATTSGHRVNLLLWCRSSVFREVKRYQTDCSSWCGECSKVKREMQCSRVTSTKSELLAKEGESTSK 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03427 386 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 238 337 IPR005123 -
Arst5g03427 386 MobiDBLite consensus disorder prediction 1 50 - -
Arst5g03427 386 SMART p4hc 158 336 IPR006620 GO:0005506|GO:0016705|GO:0031418
Arst5g03427 386 Gene3D q2cbj1_9rhob like domain 160 337 - -
Arst5g03427 386 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 17 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03427 Arst-Chr5 93266170 93270987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g03427 - - jre:108982218 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03427 5 93266170 93270987 Arst3g05300 3 128096854 128100585 ECH
Arst5g03427 5 93266170 93270987 Arst5g03427 5 93266170 93270987 ECH
Arst3g05300 3 128096854 128100585 Arst5g03427 5 93266170 93270987 PCT