Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05300 ATGTCCCTCCGCAGCGAATCGACTGACCACTGGAGGGTGGCGTCCCCGGCATTGAGGGGCGCCGAAAACGCCGTCCCCGGGTGCGCATACGGTGGCGCGGTTTCGAGCCAGAGACTGAGGGTGAACCCGATCAGAGACCACGTATCGGAATCGTACGATGAATTGGAGTTGGATTTCAGCCCTTCGATTTTCAGCTCTCTGGAGAAGCACCTTCCGATGAATATGCTCAATGCACCTCGCGGGGACAAGCTCAAGTACCTCAGAACCATTCTCCTGGACTATCTTCCTCCTGCCGCTCGCATTAGGGACCAAAAGTATAGAGAATACACACAGATGATACTATCAAATTATAAGCCTCTCAATAAAGAGTTGTACGCTATGAATCCTACAGCATTCTTTGTCCCAGCATTCCTGAAAGCAATTAGTGATAATAATGAAGACAGCTTTAGAAGTATAGTTTCTGAGCCCTTCCCTGGCATTTTTACATTTGAAATGCTTCAGCCACACTTTTGTGAATTGCTGTTATCTGAGGTTGAAAGCTTTGAGAGGTGGGCTTTCAAAACAAAATTTCAGATTATACGTCCCAATACAATGAATAAGTATGGTACTGTACTTGATGACTTTGGCCTTCAAACTATGCTTGCCAAGCTTAGAGAAAATTTCATTAGTCCTTTGTCTAAAGTGTTTTTTGCAGAACTTGGTGGATCAACCTTGGATGCTCATCATGGGTTTATTGTGGAATATGGCAAAGATAGAGATATTGACTTAGGTTTCCATGTGGATGATGCAGACATAACCTTGAATGTTTGCTTGGGCAAGCAATTTTCTGGAGGGGAATTGTTTTTTCGGGGCATGCGTTGTGATAAACATATAAATACAGAAAGTATTGCAGAGGAGATCTTTGATTATTCGCATGTCCCTGGACAAGCTGTCCTTCATCATGGTCGTCATCGCCATGGTGCTAGAGCCACTACATGGGGTCATCGGGTTAACCTAGTTCTTTGGTGCCGAAGTTCTGCTTTTAGAGAGCTGCAAAGGTATAAATCAGATTTCTCTAGCTGGTGTAATGTGTGCACTCGTCAGAAGAAAGAACGGCAGCGCAAAACAATAGATATTACCAGCTTGGATTTGTTCAAATGGAAAGGTGAAGCAACTGCATGA 1161 0.4436 MSLRSESTDHWRVASPALRGAENAVPGCAYGGAVSSQRLRVNPIRDHVSESYDELELDFSPSIFSSLEKHLPMNMLNAPRGDKLKYLRTILLDYLPPAARIRDQKYREYTQMILSNYKPLNKELYAMNPTAFFVPAFLKAISDNNEDSFRSIVSEPFPGIFTFEMLQPHFCELLLSEVESFERWAFKTKFQIIRPNTMNKYGTVLDDFGLQTMLAKLRENFISPLSKVFFAELGGSTLDAHHGFIVEYGKDRDIDLGFHVDDADITLNVCLGKQFSGGELFFRGMRCDKHINTESIAEEIFDYSHVPGQAVLHHGRHRHGARATTWGHRVNLVLWCRSSAFRELQRYKSDFSSWCNVCTRQKKERQRKTIDITSLDLFKWKGEATA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05300 386 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 239 338 IPR005123 -
Arst3g05300 386 Gene3D q2cbj1_9rhob like domain 160 338 - -
Arst3g05300 386 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 32 373 - -
Arst3g05300 386 SMART p4hc 158 337 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05300 Arst-Chr3 128096854 128100585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05300 - - qsu:111987273 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g03427 5 93266170 93270987 Arst3g05300 3 128096854 128100585 ECH
Arst3g05300 3 128096854 128100585 Arst3g05300 3 128096854 128100585 ECH
Arst3g05300 3 128096854 128100585 Arst5g03427 5 93266170 93270987 PCT