Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01546 ATGGCATCAAAATCATTTAAGCCTAGTCGATTGTCTCAATCAAGTTCAACAAGGTCTGATGTCAATGAAAGCCAGAAAGTAACATTTGCTCGGAGAACGTCCTCCGGTCGCTATGTCAGCTACTCTAGAGATGATCTTGACAGTGAACTTGGGAGCACTGACTTTGCGAATTATACAGTGCATTTACCACCAACCCCAGACAACCAACCTATGGATCCATCGATTTCACAGAAAGTTGAGGAGCAGTATGTGTCGAATTCACTCTTCACGGGTGGATTCAACAGTGTTACAAGAGCCCATTTGATGGATAAGGTGATAGAATCCGAGGCAAACCATCCACAGATGGCCGGAGCAAAAGGATCCTCATGTGCAATTCCTGGTTGTGATTCTAAAGTGATGAGTGATGAGCGCGGCGTTGATATTCTTCCTTGTGAGTGTGACTTTAAGATATGTAGGGATTGTTATATAGATGCAGTAAAAGCAGGAGGTGGGATATGCCCGGGATGCAAGGAGCCGTATAAGAACACAGAATTAGATGAAGTGGCGGTGGACAATTCACGCCCCCTTCCGCTTCCTCCGCCTAGTGGAATGTCTAAAATGGAGAGGAGATTGTCCTTGATGAAGTCAACAAAGTCAGCATTAATGAGGAGCCAAACTGGAGACTTCGATCATAATAGGTGGCTCTTTGAGACAAAGGGAACCTATGGCTATGGCAATGCTATATGGCCAAAGGAAGGAGGTTTCGGAAATGAAAAAGAGGATAGTGTTGCTGAGCCAACTGAGTTAATGAACAGACCCTGGAGGCCGCTTACTCGGAAATTGAAAATACCTGCTGCTGTTCTGAGTCCATATCGCTTGCTCATTTTTGTTCGATTGGTGGTCCTGACTCTATTCCTTATGTGGAGAGTGAGCCACAAAAATACTGATGCAATCTGGCTGTGGGGTATGTCCGTTGTTTGTGAGATATGGTTTGCCTTCTCCTGGCTTCTAGATCAACTTCCCAAACTATGCCCGATAAATCGTTCCACGGATCTCAATGTTCTGAAGGAGAAGTTCGAGACACCGACTCCTAACAATCCTACAGGGAAGTCTGATCTTCCAGGCATTGATGTCTTTGTGTCTACTGCAGATCCGGAGAAAGAACCACCTCTTGTCACAGCAAACACCATATTGTCCATTTTAGCTGCTGATTACCCTGTTGAGAAGCTTTCTTGCTATGTTTCCGATGATGGAGGCGCCCTTCTTACTTTTGAGGCAATGGCTGAAGCTGCCAGCTTTGCTAATATTTGGGTTCCCTTCTGTCGTAAACACGATATCGAGCCAAGGAATCCTGAATCATATTTCAGCCTAAAGAGAGATCCTTACAAGAACAAAGTAAAGCCAGATTTTGTCAAGGATCGAAGACGGGTGAAGCGTGAGTATGATGAGTTCAAGGTTAGGATCAATAGTTTGCCTGACTCAATCCGTCGTCGGTCAGATGCCTATCATGCTAGAGAGGAAATCAAGGCCATGAAACTTCAGAGACAAAACAAAGAAGACGAACCCATAGAACCGGCAAAGATTCCAAAAGCAACATGGATGGCTGATGGAACTCATTGGCCAGGTACTTGGTTAAGTCCTACATCTGAACACACAAGGGGAGACCATGCTGGTATAATTCAGGTGATGTTAAAACCTCCCAGTGATGAACCTCTTCTTGGAAATGCTGATGATACAAAGCTCATTGATGTGACTGATGTTGATATCCGACTTCCCCTTCTTGTTTATGTTTCACGGGAGAAGCGTCCGGGCTATGATCACAACAAAAAGGCCGGGGCCATGAATGCCTTGGTCCGAGCCTCAGCCATAATGTCTAATGGTCCTTTTATACTCAATCTCGACTGCGACCACTATATCTACAACTCCAAAGCTATGAGGGAAGGCATGTGCTTTATGATGGATCGGGGAGGCGACCGCATTTGTTATGTCCAGTTCCCCCAGAGATTCGAGGGGATCGATCCCTCTGATAGATATGCTAATCACAACACCGTCTTCTTTGATGTCAACATGAGAGCCCTTGATGGACTTCAAGGGCCAGTCTATGTGGGAACTGGGTGCCTTTTCAGACGCGTTGCGCTATACGGTTTCGACCCACCACGTTCAAAAGAGCATAACCCGGGTTGTTGTAGTTGCTGCTTTGGTCGTCAGAAGAAGCTTGCTTCAATGGCAAGCACCCCCGAAGAGAACAGGGCACTAAGAATGGGCGAATCTGATGATGAAGAAATGAATCTATCTTTGTTCCCTAAGAAGTTTGGAAACTCAACATTCCTCATTGATTCAATCCCAGTGGCAGAGTTCCAAGGTAGACCTCTTGCTGATCACCCTGCTGTGAAAAATGGACGGCCACCGGGTGCTCTCACCATTCCCCGGGATCTTCTTGATGCATCAACCGTGGCCGAGGCCATCAGTGTCATCTCCTGTTGGTACGAGGACAAGACCGAGTGGGGACAGCGAGTTGGATGGATCTACGGCTCGGTTACTGAGGATGTGGTCACTGGATATAGGATGCACAACAGGGGATGGAAATCAGTTTACTGTGTGACTAAGCGCGATGCCTTCCGCGGCACGGCACCAATAAATCTCACTGACAGGCTGCATCAGGTCCTTAGATGGGCTACTGGCTCAGTTGAAATATTCTTCTCACGGAACAATGCCCTTCTTGCTAGCCCAAGAATGAAATTTCTTCAACGTATCGCATACCTCAACGTCGGAATTTACCCGTTCACTTCCATATTCCTTATTGTTTACTGCTTCCTCCCGGCGCTATCCCTCTTCTCCGGCCAGTTCATTGTGCAGACTCTCAATGTTACTTTCCTTTCTTACCTATTAGGCATCACTGTCACTTTGTGCATGCTTGCAGTGCTCGAAATCAAGTGGTCCGGCATTGAGTTGGAAGAGTGGTGGCGGAACGAGCAGTTCTGGCTGATTGGAGGGACCAGTGCTCATCTAGCTGCAGTCCTCCAAGGCTTGCTCAAAGTCATAGCCGGGATAGAGATCTCATTCACATTGACTTCAAAATCTGCCGGCGATGACGTAGATGACGAGTTTGCTGACCTCTACATTGTGAAATGGACATCCCTGATGATCCCACCAATAACAATCATGATGGTTAATTTGATAGCAATTGCAGTGGGAGTTAGCAGAACGATATACAGTGTGATACCGCAGTGGAGCCGTCTAATAGGTGGTGTTTTCTTCAGTTTCTGGGTGTTGACTCATCTATACCCATTTGCAAAAGGTTTGATGGGAAGGAGAGGGAGGACACCTACCATTGTTTTTGTATGGTCAGGACTCATAGCAATCACAATCTCTCTCCTGTGGGTGGCAATCAATCCCCCTGCTGGTTCTAACCAAATTGGTGGTTCATTCCAGTTCCCATGA 3420 0.4658 MASKSFKPSRLSQSSSTRSDVNESQKVTFARRTSSGRYVSYSRDDLDSELGSTDFANYTVHLPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEANHPQMAGAKGSSCAIPGCDSKVMSDERGVDILPCECDFKICRDCYIDAVKAGGGICPGCKEPYKNTELDEVAVDNSRPLPLPPPSGMSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETKGTYGYGNAIWPKEGGFGNEKEDSVAEPTELMNRPWRPLTRKLKIPAAVLSPYRLLIFVRLVVLTLFLMWRVSHKNTDAIWLWGMSVVCEIWFAFSWLLDQLPKLCPINRSTDLNVLKEKFETPTPNNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHDIEPRNPESYFSLKRDPYKNKVKPDFVKDRRRVKREYDEFKVRINSLPDSIRRRSDAYHAREEIKAMKLQRQNKEDEPIEPAKIPKATWMADGTHWPGTWLSPTSEHTRGDHAGIIQVMLKPPSDEPLLGNADDTKLIDVTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHNPGCCSCCFGRQKKLASMASTPEENRALRMGESDDEEMNLSLFPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLIGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGSNQIGGSFQFP 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01546 1139 FunFam Cellulose synthase-like protein D3 106 188 - -
Arst5g01546 1139 Pfam Cellulose synthase 369 1129 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst5g01546 1139 Pfam Cellulose synthase 369 1129 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst5g01546 1139 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 187 IPR013083 -
Arst5g01546 1139 SUPERFAMILY Nucleotide-diphospho-sugar transferases 384 933 IPR029044 -
Arst5g01546 1139 Pfam RING/Ubox like zinc-binding domain 125 174 - -
Arst5g01546 1139 MobiDBLite consensus disorder prediction 1 34 - -
Arst5g01546 1139 Coils Coil 494 514 - -
Arst5g01546 1139 SUPERFAMILY RING/U-box 108 177 - -
Arst5g01546 1139 FunFam cellulose synthase-like protein D3 574 711 - -
Arst5g01546 1139 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 570 710 IPR029044 -
Arst5g01546 1139 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 268 1115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01546 Arst-Chr5 17449578 17454489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01546 1 1139 Glycosyltransferase AT3G03050 84.878 0.0 2038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01546 K20924 - gmx:100792604 2226.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01098 3 8417556 8422287 Arst5g01546 5 17449578 17454489 ECH
Arst5g01546 5 17449578 17454489 Arst5g01546 5 17449578 17454489 ECH