Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01098 ATGGCGTCAAAACAATTTAAGGGTAGCAGATCATCTCTATCTGCAACTTCTGATGCACCTGAAAACCAGAAGCCTCCTTTACCTCCAACCATAACATTCGGCCGAAGAACTTCGTCGGGTCGTTACATCAGTTACTCTAGAGATGATCTTGACAGTGAGCTAGGAAACAATGACTTCATGAATTACACAGTGCATTTGCCACCAACCCCAGATAACCAACCTATGGATCCATCAATCTCGCAGAAAGTTGAGGAACAATATGTGTCGAATTCACTCTTCACAGGCGGATTCAACAGTGTGACCCAAGCACATCTTATGGAAAAGGTGATAGAATCCGAAGCAAACCATCCACAGATGGCTGGTGCAAAAGGATCTTCATGTGCAATACCTGGTTGTGATGCTAAGGTGATGAGGGATGAACGTGGTGTTGATATTCTTCCATGTGAGTGTGATTTCAAGATATGTAGAGACTGCTACATAGATGCAGTGAAAATAGGTGGTGGTATGTGTCCAGGGTGCAAGGAACCATACAAGAACACAGAACTAGATGAAGTGGCAGTGGATAATGGAAGGCCTCTTCCACTTCCACCGCCGAACCGGGTGTCTAAGATGGAGAGGAGATTGTCATTGATGAAGTCAACAAAGTCAGCTCTGATGAGAAGCCAAACTGGTGATTTTGATCACAATAGGTGGCTCTTTGAAACAACAGGTACCTATGGCTATGGCAATGCTATATGGCCAAAGGAAGGGAATTTCGGAAATGGAAATGGAGATGACAATAGTGTTGCTGATCCTTCTGAGTTGATGAACAGACCTTGGAGACCACTTACAAGGAAACTCAAGATACCTGCTGCTATTCTGAGTCCATATCGTCTCATCATTTTTGTAAGATTGGCTGTGTTAGTACTATTCCTGATGTGGAGGGTGACACACCCAAATAAAGAGGCAATCTGGCTATGGGGAATGTCTGTGGTTTGTGAGATATGGTTTGCATTCTCTTGGCTTCTTGATCAGTTGCCAAAGCTATGTCCAGTGAATCGTTCCACCGATCTTAATGTTCTTAAGGAAAAATTTGAAACACCAACTCCTGACAATCCTACTGGAAAATCTGATCTTCCAGGCATAGATATTTTTGTCTCTACTGCAGATCCTGAAAAAGAACCACCTCTTGTAACTGCAAACACCATCTTGTCTATTCTTGCTACTGATTACCCTGTTGAGAAGCTTTCTTGCTATGTTTCCGACGATGGTGGAGCTCTTCTAACTTTTGAGGCAATGGCTGAAGCTGCTAGCTTTGCTAATGTATGGGTTCCTTTCTGCCGGAAACACGACATTGAGCCGAGAAATCCTGAATCATATTTCAACTTGAAGAGAGACCCTTACAAGAACAAAGTCAGGCCGGATTTCGTGAAGGACCGTAGGCGTGTGAAGCGCGAGTATGATGAGTTCAAAGTTAGGATCAATGGCCTGCCTGACTCAATTCGTCGCCGGTCCGATGCATTTCATGCAAGGGAAGAAATCAAGGCCATGAAACTTCAGAGACAGAACAGGGAAGATGAACCTGTGGAGCCTGTAAAGATTCCAAAAGCAACATGGATGGCTGATGGAACTCACTGGCCAGGAACTTGGTTGAATTCTGCACCTGAACACTCCAGGGGTGACCATGCTGGTATAATTCAGATGATGTTGAAACCTCCAAGTGATGAACCTCTTCTAGGAACCAGTGACGATTCAAATCTCATTGACATGACCGATGTGGATATCCGTCTTCCCCTTCTTGTTTACGTTTCCAGAGAGAAACGTCCGGGCTATGATCACAACAAGAAAGCTGGAGCCATGAACGCCTTGGTTCGAGCCTCGGCAATCATGTCCAATGGACCTTTCATACTCAACCTTGACTGTGATCACTATGTCTATAACTCAAAGGCAATGAGGGAAGGTATGTGCTTCATGATGGATCGAGGAGGCGACCGCCTTTGCTATGTCCAGTTCCCACAACGGTTCGAGGGGATTGACCCCTCAGATAGATATGCCAATCACAATACTGTATTCTTTGATGTCAACATGAGAGCCCTTGATGGACTTCAAGGGCCAGTTTATGTAGGAACCGGTTGTCTATTCAGAAGGGTAGCCCTCTATGGTTTCGATCCACCTCGCTCCAAAGAACATAACTCGGCTTCAGGCTGCTGTAGTTGCTGCCTCGGCCGGAGGCGAAAGAAGAGCACCCCTGAAGAGAACAGAGCACTGAGAATGGGTGATTCTGATTATGATGAAGAAATGAACCTTTCCTTGTCCCCGAAGAAATTTGGAAACTCAACTTTCCTCATTGATTCAATTCCAGTGGCAGAGTTCCAAGGCAGGCCACTTGCTGACCACCCTGCAGTCAAGAATGGCCGTCCCCCGGGTGCTCTCACCGTCGCCCGGGAGCATCTCGACGCATCGACCGTGGCCGAGGCCATCAGTGTTATCTCCTGTTGGTATGAGGAGAAGACTGAATGGGGACACCGTGTAGGATGGATCTACGGATCAGTGACTGAGGATGTTGTCACCGGCTATAGGATGCACAACAGAGGATGGAAATCGGTTTACTGTGTGACAAAACGCGACGCATTCCGGGGAACTGCTCCGATCAACCTCACCGATAGACTCCATCAGGTTCTCCGGTGGGCTACTGGTTCAGTTGAAATATTCTTCTCAAGAAACAACGCCATTCTTGCAAGCTCAAGAATGAATCTTCTTCAGCGAATTGCATACCTTAACGTCGGAATCTATCCCTTCACTTCCATATTCCTTATTGTCTACTGCTTTCTTCCGGCACTCTCCCTCTTCTCCGGCCAGTTCATCGTTCAGTCCCTCAGCGTCACGTTCCTTGTTTATCTCTTAACAATCACGGTTACTTTATGCATGCTTGCAATTCTGGAGATCAAGTGGTCCGGCATTGAGCTAGAAGAATGGTGGCGAAACGAACAGTTTTGGCTAATCGGCGGAACAAGCGCCCACCTGGCGGCGGTTCTACAAGGCCTGCTAAAAGTGATAGCAGGAATAGAGATCTCATTCACATTAACCTCCAAGTCCGGTGGCGACGACTTAGACGACGAGTTTGCCGATCTATACATTGTAAAATGGACATCACTGATGTTGCCACCAATCACCATAATGATGGTGAACTTGATAGCAATAGCGGTTGGTGTAAGCAGGACTATTTACAGTGCGATACCTCAATGGAGCAAGTTGCTAGGTGGAGTTTTCTTCAGCTTTTGGGTGTTGACTCATTTATACCCGTTTGCAAAAGGGTTGATGGGAAGAAGAGGGAGAACACCTACCATTGTTTTTGTGTGGTCTGGTCTTATTGCTATCACAATTTCACTCCTTTGGGTCGCTATTAATCCACCTCAAGGTTCCAACCAAATTGGTGGTTCCTTCCAGTTCCCATAG 3435 0.462 MASKQFKGSRSSLSATSDAPENQKPPLPPTITFGRRTSSGRYISYSRDDLDSELGNNDFMNYTVHLPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTQAHLMEKVIESEANHPQMAGAKGSSCAIPGCDAKVMRDERGVDILPCECDFKICRDCYIDAVKIGGGMCPGCKEPYKNTELDEVAVDNGRPLPLPPPNRVSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETTGTYGYGNAIWPKEGNFGNGNGDDNSVADPSELMNRPWRPLTRKLKIPAAILSPYRLIIFVRLAVLVLFLMWRVTHPNKEAIWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFETPTPDNPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILATDYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAFHAREEIKAMKLQRQNREDEPVEPVKIPKATWMADGTHWPGTWLNSAPEHSRGDHAGIIQMMLKPPSDEPLLGTSDDSNLIDMTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYVYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHNSASGCCSCCLGRRRKKSTPEENRALRMGDSDYDEEMNLSLSPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTVAREHLDASTVAEAISVISCWYEEKTEWGHRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAILASSRMNLLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQSLSVTFLVYLLTITVTLCMLAILEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDLDDEFADLYIVKWTSLMLPPITIMMVNLIAIAVGVSRTIYSAIPQWSKLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPQGSNQIGGSFQFP 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01098 1144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 191 IPR013083 -
Arst3g01098 1144 MobiDBLite consensus disorder prediction 1 21 - -
Arst3g01098 1144 SUPERFAMILY Nucleotide-diphospho-sugar transferases 390 938 IPR029044 -
Arst3g01098 1144 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 581 716 IPR029044 -
Arst3g01098 1144 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 274 1120 - -
Arst3g01098 1144 MobiDBLite consensus disorder prediction 1 38 - -
Arst3g01098 1144 Pfam Cellulose synthase 375 1133 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst3g01098 1144 SUPERFAMILY RING/U-box 112 181 - -
Arst3g01098 1144 Pfam Cellulose synthase 375 1133 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst3g01098 1144 FunFam Cellulose synthase-like protein D3 110 192 - -
Arst3g01098 1144 Pfam RING/Ubox like zinc-binding domain 129 178 - -
Arst3g01098 1144 FunFam cellulose synthase-like protein D3 580 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01098 Arst-Chr3 8417556 8422287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01098 2 1144 Glycosyltransferase AT3G03050 83.624 0.0 2026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01098 K20924 - gmx:100792604 2133.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01098 3 8417556 8422287 Arst5g01546 5 17449578 17454489 ECH
Arst3g01098 3 8417556 8422287 Arst3g01098 3 8417556 8422287 ECH