Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01259 ATGGCAAAGAGCTACTTCAAACAAGAGCATGATCTTGAGAAGAGAAGAGCAGAGGCCGCAAGGATTAGGGAGAAATACCCAGACAGGATCCCGGTGATTGTTGAAAAGGCCGAAAGAAGTGACATCCCAAGCATTGACAAGAAGAAGTACCTGGTCCCTGCTGACCTGACAGTGGGACAGTTTGTGTATGTTATCCGCAAAAGGATTAAATTAAGTGCTGAAAAGGCCATCTTCATTTTTGTGGACAATGTACTTCCTCCCACAGGAGCAATTATGTCTGCTGTATATGAAGAGAAGAAGGATGAAGATGGCTTTCTTTATGTAACATACAGTGGCGAGAACACATTTGGGGATCTCACTTCCCACATTCATTAG 375 0.4373 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAVYEEKKDEDGFLYVTYSGENTFGDLTSHIH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01259 124 Gene3D - 1 117 - -
Arst5g01259 124 CDD Ubl_ATG8 12 114 - -
Arst5g01259 124 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 3 117 IPR004241 -
Arst5g01259 124 FunFam Autophagy-related protein 1 117 - -
Arst5g01259 124 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Arst5g01259 124 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01259 Arst-Chr5 13439425 13441736 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01259 K08341 - gmx:100499835 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01259 5 13439425 13441736 Arst5g01259 5 13439425 13441736 ECH
Arst5g01259 5 13439425 13441736 Arst1g01924 1 37988601 37991619 PCT