Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01924 ATGGCAAAGAGTTACTTCAAACAAGAACATGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGGATTAGGGAGAAATATCCGGATCGTATCCCGGTGATTGTGGAGAAGGCGGAAAGAAGTGATATCCCAAGTATTGACAAGAAAAAGTACCTTGTCCCTGCTGATCTGACAGTTGGACAATTTGTCTATGTAATCAGAAAGAGGATCAAATTAAGTGCAGAAAAGGCAATCTTTATATTTGTGGATAATGTCCTTCCACCTACAGGAGCAATAATGTCTGCCATATATGATGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACTTACAGTGGAGAGAACACCTTTGGGGACCTAACTTCCCACTAG 369 0.4092 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLTSH 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01924 122 FunFam Autophagy-related protein 1 117 - -
Arst1g01924 122 CDD Ubl_ATG8 12 114 - -
Arst1g01924 122 Gene3D - 1 117 - -
Arst1g01924 122 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 3 117 IPR004241 -
Arst1g01924 122 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Arst1g01924 122 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01924 Arst-Chr1 37988601 37991619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01924 K08341 - gmx:100499835 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01924 1 37988601 37991619 Arst1g01924 1 37988601 37991619 ECH
Arst5g01259 5 13439425 13441736 Arst1g01924 1 37988601 37991619 PCT