Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01245 ATGGGAACTTCTACTAATAATAACGACTCTTCTAATGATATTCCATGTTCTTACATTCCCGTGCCGGATAGCCTTGATGCGGCTGGGGCTATGGCAGAGCCGCGGAGACAGGTGAAGGGGTTGCTTGTGATCCTTTGTGGGCTTTTAGTACTTTTTTTATTGGTGGCCTTCAATGGGTCTTATAGGGGATCCAATAATGCGCATGAACAAGCGTCATTGGCAGCAGCATTAACCAGCATTGTTGACGAAAAATCTACATCATCAGAAACAGTGCCTTCTTCTTCAACATGGTCTCGCGGTGTGTCTGCTGGTGTGTCGGAGAAGTCCAACTGGCTTTTCAGCAGCAACAATGGTGAAATGTATCCATGGAACAATAGCATGTTGTCGTGGCAGAGAACAGCTTTTCATTTTCAGCCTGAGAAGAATTGGATGAACGATCCTAATGGTCCACTATACTACAAGGGATGGTATCACTTCTTCTACCAGTACAATCCAAACGCAGCTGTATGGGGAGACATAGTTTGGGGACACGCCATCTCAAGGGACTTGATTCACTGGCAACACCTTCCACTTGCTATGGTTGCTGACCAATGGTACGACAAGAACGGCGTTTGGACCGGCTCCGCCACCATCTTACCCAACGGCAAAATCATCATGTTGTACACTGGTTCCACCAACGAGTCAGTGCAGGTTCAAAACCTTGCATACCCTGCTGATCCATCTGATCCCCTCCTCATCGATTGGGTCAAGTACCCTTCCAACCCTGTCTTGTTCCCTCCACCTGGCATTGGTGCAACTGACTTTCGTGACCCAACCACCGCTTGGCTTACCTCCGAAGGCAAGTGGCGTATCACCATTGGATCCAAGCTTAACAAAACTGGCATTGCTTTGGTTTATGACACCCTGGACTTCAAGACCTACGAGCAGATAGAGGGCTTCCTTCGTGCTGTTCCTACAACCGGCATGTGGGAGTGTGTTGACTTTTTCCCTGTTTCCAAGGAGGTTGAGAATGGCTTGAACACTTCTGTTAATGGGGCGGGTGTGAAGCATGTCATGAAGGTTAGTTTGGATGATGACAGGCATGATTACTATTCAATTGGCAGCTATGATGAGAAGAATGTCAAGTTCATACCAGATGATGTTGACAACGATGTTGGTGTTGGATTGAGGTATGATTATGGTGTGTTCTATGCGTCCAAAACTTTCTTTGATGATAGCAAGAGAAGGAGAGTGTTGTGGGGTTGGATTGGAGAGTCTGATGCTGAATATGCTGATGTTGCCAAAGGCTGGGCTTCACTTCAGGGTATTCCGAGAACAGTGACACTTGATACGAAAACAGGTAGCAACTTAATTCAATGGCCTGTTGAAGAGGTGGAGAGCTTGAGACTGAGAAGCGATGAGTTTAAGGATTTGAAGGCAAAGCCAGGATCCGTGGTCCCAATAGATGTTGGGACAGCTACACAGCTTGATATTGTAGCTGAATTTGAGATTGAAAAGGAAGAGTTGGAGAAGGCAACAAGCGAGTCTAATGTGGACTACTACAGTTGCGAGAGCAGCGGTGGAGCAGCACATCGTGGTGCCTTGGGACCTTTTGGTCTTTTGGTTCTTGCAGATGATGGGCTTTCCGAGTACACTCCTGTGTACTTCTATGTGATTAAAGGAAGTGATGGAAATCTCAAGACTTCATTCTGCTCCGATCAGTCAAGGTCGTCTGTGGCAAGCGATGTAGTAAAGAAAACATTTGGAAGCTTGGTTCCAGTACTTGAAGGTGAGAAGTTTTCTGTGAGGATATTGGTGGACCATTCAATAGTGGAAAGCTTTGCGCAAGGTGGAAGGACCACGGTGACATCAAGGGTGTACCCAACAAGGGCAATCTATGGAGCTGCTAGGTTGTTCTTCTTCAATAATGCAACTGCTGCTTCTGTTACTGCTTCACTCAAAGTTTGGCAGATGAATTCTGCATTCATAAGACCTTACAACCCTGACCAGACCAACTAA 1998 0.4645 MGTSTNNNDSSNDIPCSYIPVPDSLDAAGAMAEPRRQVKGLLVILCGLLVLFLLVAFNGSYRGSNNAHEQASLAAALTSIVDEKSTSSETVPSSSTWSRGVSAGVSEKSNWLFSSNNGEMYPWNNSMLSWQRTAFHFQPEKNWMNDPNGPLYYKGWYHFFYQYNPNAAVWGDIVWGHAISRDLIHWQHLPLAMVADQWYDKNGVWTGSATILPNGKIIMLYTGSTNESVQVQNLAYPADPSDPLLIDWVKYPSNPVLFPPPGIGATDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTLDFKTYEQIEGFLRAVPTTGMWECVDFFPVSKEVENGLNTSVNGAGVKHVMKVSLDDDRHDYYSIGSYDEKNVKFIPDDVDNDVGVGLRYDYGVFYASKTFFDDSKRRRVLWGWIGESDAEYADVAKGWASLQGIPRTVTLDTKTGSNLIQWPVEEVESLRLRSDEFKDLKAKPGSVVPIDVGTATQLDIVAEFEIEKEELEKATSESNVDYYSCESSGGAAHRGALGPFGLLVLADDGLSEYTPVYFYVIKGSDGNLKTSFCSDQSRSSVASDVVKKTFGSLVPVLEGEKFSVRILVDHSIVESFAQGGRTTVTSRVYPTRAIYGAARLFFFNNATAASVTASLKVWQMNSAFIRPYNPDQTN 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01245 665 ProSitePatterns Glycosyl hydrolases family 32 active site. 136 149 IPR018053 GO:0004553|GO:0005975
Arst5g01245 665 Pfam Glycosyl hydrolases family 32 C terminal 457 650 IPR013189 -
Arst5g01245 665 Pfam Glycosyl hydrolases family 32 N-terminal domain 136 454 IPR013148 -
Arst5g01245 665 CDD GH32_Fruct1-like 142 442 - -
Arst5g01245 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 454 655 IPR013320 -
Arst5g01245 665 Gene3D - 466 651 - -
Arst5g01245 665 SUPERFAMILY Arabinanase/levansucrase/invertase 129 455 IPR023296 -
Arst5g01245 665 Gene3D Glycosyl hydrolase domain; family 43 140 465 IPR023296 -
Arst5g01245 665 SMART glyco_32 136 611 IPR001362 GO:0004553|GO:0005975
Arst5g01245 665 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 466 651 - -
Arst5g01245 665 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 124 654 - -
Arst5g01245 665 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 140 466 - -
Arst5g01245 665 Pfam Beta-fructofuranosidase, N-terminal domain 17 128 IPR021792 GO:0004564
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01245 Arst-Chr5 13202514 13206620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01245 16 660 Glycoside Hydrolase AT1G12240 64.910 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01245 K01193 - gmx:100798772 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01245 5 13202514 13206620 Arst5g01245 5 13202514 13206620 ECH
Arst5g01245 5 13202514 13206620 Arst1g01979 1 41758912 41765057 PCT