Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01979 ATGCTCTCGTGGCAGAGGACTGCCTTCCACTTCCAGCCCGATAAGAACTGGATGAACGGACCTGTATACTACAAGGAATGGTATCACTTCTTCTACCAGTATAATCCAAACGATGCCGTTTGGGGTGACATAGTTTGGGGCCACGCAGTGTCAAGGGACATGATACATTGGCTTTACCTTCCAATCGCAATGGTTCCAGACCAATGGTACGATGCAAATGGTGTGTGGACCGGCTCAGCCACCATCTTATCCGATGGCCAACTCGTCATGCTCTACACCGGTTCGACCAACGAGTCGGTTCAAGTACAAAACCTGGCTTATCCGGCTGATCCTTCCGACCCTCTCCTTCTGAATTGGACCAAGTACGACAAAAACCCGGTTCTATCCCCTCCTCCGGGCATTCATTACCGCGACTTCCGCGATCCGACGACGGCCATGCTGACGTCGGAAGGCAAGTGGCGTATCAGCATTGGGTCCAAGATCAACAAAACCGGCATTGCGCTTATCTATGACACTGAGGATTTCAAAAATTTCGAGCTCAAGAATGGGTGGCTCCGGGCCGTGCAGGGAACCGGTATGTGGGAGTGCGTTGACTTTTATCCAGTGTCAAGCATCAATGATGTTGGATTGGATACCTCTGCCTATGGGGATGGTGTTAAGCATGTGGTGAAGGTGAGCTTGGATGATGATAGAAATGATTACTATGCAATTGGTTCTTATGATGAGAAGCTTGCAAGCTTCTTGCCTGATGATGTTAAGAATGATGTTGGTATTGGACTGAGGTATGACTATGGTAATTTCTATGCTTCCAAGACATTCTTTGATCCAAGTAAGCAAAGGAGAATCTTGTGGGGTTGGATTACAGAGTATGATAGCGAGTGTGTTGATAGAACCAAGAGCTGGGCATCACTTCAGGGCATTCCGAGGACAGTGAGACTTGATAGGAAGACATGGAGCAATTTGATTCAGTGGCCTGTTGAGGAGGTGAATAGTTTAAGATTGAGAAGCAGTGAGTTTAAGGATTTGAAGGCCAAGCCTGGTTCAGTTGTTCCACTACAAGTTGAAACAGCCACACAGTTGGATATTGTTGCGGAATTTGAAGTAGACAAGGAAGCACTGGAGACGACATTACCGGAGAGCGATACAGACTACATTTGCGAAAGCAGCGGCGGAGCTTCTGGCCGTGGTGCCTTGGGACCTTTTGGTCTTCTTGTGTTAGCAGATGCTGGACTTTCTGAATTTACTCCTTTGTACTTCTATGTCTCCAAAGGACTCAATGGAAGTCTTCGCACTACTTTCTGCTCTGACCAGTCAAGGTCTTCTGTAGCAACGAATGTTAACAAGAAGGTGTTAGGTAGCGTTGTGCCAGTTTTTGGAGGTGAAAAGTTGTCTTTAAGAGTACTGGTGGACCATTCTATAGTTGAAAGCTTTGCTCAAGGTGGAAGGACTTGTGTCACATCTCGGGTGTATCCAACAAGAGCAATCTATGGAGCTGCCAAATTATTCGTCTTCAACAATGCAACTGATGCCACTGTCACAGCATCAATCAAAGTTTGGCAGATGAACTCTGCATTTATTCGCCCATACCACCCTGAAACTGACACTTAG 1608 0.4683 MLSWQRTAFHFQPDKNWMNGPVYYKEWYHFFYQYNPNDAVWGDIVWGHAVSRDMIHWLYLPIAMVPDQWYDANGVWTGSATILSDGQLVMLYTGSTNESVQVQNLAYPADPSDPLLLNWTKYDKNPVLSPPPGIHYRDFRDPTTAMLTSEGKWRISIGSKINKTGIALIYDTEDFKNFELKNGWLRAVQGTGMWECVDFYPVSSINDVGLDTSAYGDGVKHVVKVSLDDDRNDYYAIGSYDEKLASFLPDDVKNDVGIGLRYDYGNFYASKTFFDPSKQRRILWGWITEYDSECVDRTKSWASLQGIPRTVRLDRKTWSNLIQWPVEEVNSLRLRSSEFKDLKAKPGSVVPLQVETATQLDIVAEFEVDKEALETTLPESDTDYICESSGGASGRGALGPFGLLVLADAGLSEFTPLYFYVSKGLNGSLRTTFCSDQSRSSVATNVNKKVLGSVVPVFGGEKLSLRVLVDHSIVESFAQGGRTCVTSRVYPTRAIYGAAKLFVFNNATDATVTASIKVWQMNSAFIRPYHPETDT 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01979 535 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 14 337 - -
Arst1g01979 535 Pfam Glycosyl hydrolases family 32 C terminal 328 520 IPR013189 -
Arst1g01979 535 CDD GH32_Fruct1-like 16 313 - -
Arst1g01979 535 Gene3D Glycosyl hydrolase domain; family 43 14 336 IPR023296 -
Arst1g01979 535 SMART glyco_32 10 481 IPR001362 GO:0004553|GO:0005975
Arst1g01979 535 SUPERFAMILY Concanavalin A-like lectins/glucanases 325 525 IPR013320 -
Arst1g01979 535 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 4 524 - -
Arst1g01979 535 Gene3D - 337 521 - -
Arst1g01979 535 SUPERFAMILY Arabinanase/levansucrase/invertase 3 326 IPR023296 -
Arst1g01979 535 Pfam Glycosyl hydrolases family 32 N-terminal domain 10 325 IPR013148 -
Arst1g01979 535 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 337 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01979 Arst-Chr1 41758912 41765057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01979 1 532 Glycoside Hydrolase AT1G12240 66.790 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01979 K01193 - gmx:100799487 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01979 1 41758912 41765057 Arst1g01979 1 41758912 41765057 ECH
Arst5g01245 5 13202514 13206620 Arst1g01979 1 41758912 41765057 PCT