Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01101 ATGGGTTGGTGTTTTCGTGTGATTTCCCTATTATTATTGTTGTTGGGAGCAGAATCAAAGACTCATTGGAGTGACACACAGTTTCTGAAGGATTTCAAGAATGGGATTTACCCAAGTTCTGTGAACCCCGGCTCCTGCTTAAGTTCATGGGACTTCACTCTCGACCCGTGCGATAATCTCTTCACTCAGAAATTTACGTGCGGCTTCAGGTGCGACTCCATCGACTCCGGCTTGAGCCGAGTCACCGAACTCGCTCTCGACCAGGCCGGTTACTCCGGTCCCCTCCCTCCAACTTGGAATCTTCTTCCCTACCTCCAAACCCTCGATCTCTCCAACAACTTCTTCTACGGCAACATCCCCGGCTCCCTATCCAACTTGACTCGCTTGCGCCGACTCGCCCTCTCCGCTAACTCCTTCTCCGGCGCCATACCCTCCTCCGTTGGCTCCCTCTCCACTCTCGAGGAGCTCTGCCTCGATCACAACAACCTCACCGGAGCTATCCCCGCCACCTTCAACGGCCTCAAGAACTTGAAGAGGTTGGAGCTTCAATCCAACAAGCTCCAGGGTTGGGTTCCTCCATACTTGGGTCCCCTGAACAACCTTAACTACCTGGACGCCAGCGACAATTCCCTGATCGGAGAATTGCCAATCTGGCTGCCGGCTTCCCTGGTTCAGATTTCGATGAGGAACAACAAGTTGAGCGGAGTAGTAAAGCCAGAAGTGTTGAAAAACCTGAAGGACTTGCAGGTTTTGGATTTGAGTTGGAACAAGCTGAGTGGGGCAGTTCCTTTTGCTCTTTTCGAGCTACCATCGCTGCAGCAATTAACGCTGTCTTTCAACGAGTTTTCTTCGGTGGAAGGAAACTCCGCAGGATTTGAGAAGAGCGGATTGATCGCAGTAGACATAAGCAACAACAAGCTCAGGGGTAGTTTGCCATGGTTCATGGCGTGGATGCCTCAGCTTTCGGCATTGTCGCTGGAGAACAACATGTTGAGTGGCATGATACCAAAGGAGTATGCGATGAAGGTGGTGTCCCCGCGAAATGGGGAATCAAGTTTTGGGAGGCTTCTGTTGGGTGGCAACTACTTGTACGGAGGGATACCTCACCCTCTGTTGGGTCTTAAACCCGATTCTGCAAATGTCAGCCTTGCTAATAACTGCTTCTATAGGTGCCCTCGTACCTTCTTTTTCTGCCAAGGTGCTGCCCAGAAGCCCCCGCCACTGTGTCATAAGTAA 1236 0.5154 MGWCFRVISLLLLLLGAESKTHWSDTQFLKDFKNGIYPSSVNPGSCLSSWDFTLDPCDNLFTQKFTCGFRCDSIDSGLSRVTELALDQAGYSGPLPPTWNLLPYLQTLDLSNNFFYGNIPGSLSNLTRLRRLALSANSFSGAIPSSVGSLSTLEELCLDHNNLTGAIPATFNGLKNLKRLELQSNKLQGWVPPYLGPLNNLNYLDASDNSLIGELPIWLPASLVQISMRNNKLSGVVKPEVLKNLKDLQVLDLSWNKLSGAVPFALFELPSLQQLTLSFNEFSSVEGNSAGFEKSGLIAVDISNNKLRGSLPWFMAWMPQLSALSLENNMLSGMIPKEYAMKVVSPRNGESSFGRLLLGGNYLYGGIPHPLLGLKPDSANVSLANNCFYRCPRTFFFCQGAAQKPPPLCHK 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01101 411 SUPERFAMILY L domain-like 67 341 - -
Arst5g01101 411 Gene3D Ribonuclease Inhibitor 190 293 IPR032675 -
Arst5g01101 411 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Arst5g01101 411 Pfam Leucine rich repeat 223 281 IPR001611 GO:0005515
Arst5g01101 411 Gene3D Ribonuclease Inhibitor 24 189 IPR032675 -
Arst5g01101 411 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 409 - -
Arst5g01101 411 SMART LRR_typ_2 102 126 IPR003591 -
Arst5g01101 411 SMART LRR_typ_2 174 198 IPR003591 -
Arst5g01101 411 SMART LRR_typ_2 245 268 IPR003591 -
Arst5g01101 411 SMART LRR_typ_2 318 341 IPR003591 -
Arst5g01101 411 SMART LRR_typ_2 269 294 IPR003591 -
Arst5g01101 411 SMART LRR_typ_2 150 173 IPR003591 -
Arst5g01101 411 Pfam Leucine Rich Repeat 105 126 IPR001611 GO:0005515
Arst5g01101 411 FunFam Nuclear pore complex protein NUP107 23 192 - -
Arst5g01101 411 Gene3D Ribonuclease Inhibitor 294 398 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01101 Arst-Chr5 10923974 10925511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g01101 69 371 Receptor kinase-like Gene Family AT3G11080 35.974 4.17e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g01101 - - gmx:100811366 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g01101 5 10923974 10925511 Arst5g01101 5 10923974 10925511 ECH
Arst1g00181 1 1650299 1651873 Arst5g01101 5 10923974 10925511 ECH
Arst5g01101 5 10923974 10925511 Arst1g00181 1 1650299 1651873 PCT