Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g00181 ATGGTGTCTCTCAGTTTCCCACAGTTCCACTTCCATCTATTTCTGATCATTTCAGGTTTGGGAGTGATATCCACCGTTGAATCAAAGACACATTGGGGTGACGCACAAGTTCTGAAGGAACTAAAGAACAAAATCGACCCCTCTTCTCTGACTCCAGGTTCATGCGTAAGCTCATGGAACTTCACCGTGGACCCATGCGACAACCTCTTCACCGAAAAGTTCACGTGCGGTTTCAGGTGCGACTCGGTTGTTTCCGGTTTAAGCCGAGTCACCGAACTCAGTCTCGACCAGGCGGGTTACTCCGGATCCCTCTCCTCCATCTTCTGGAACCTTCCCTACCTCGAAACCCTCGACGTTTCAAACAACTACTTCTCAGGCCAAATTCCCGAGTCATTTTCAAATCTGACTCGCTTGAGTCGACTCAGTCTTTCGCGAAACTCGTTCACCGGCGAAATTCCTTCTTCCCTTGGCTCCCTCTCCATGCTCGAAGAACTCTACCTGGATAACAACAATCTCGAAGGAACAATCCCTGAGAGTTTCAATAACGGGCTCAAAACCTTGAAAAGGCTTGAAATTCAGTTCAACAACCTCAACGGAGAACTTCCGAAGAATTTTGATTCTCTCAAAAACCTTAACTACTTAGACCTCAGTGACAATGGCGTCACCGGAAAATTGCCGGAGGCTTTACCGGAGTTTTTGGTTCAGATTTCAATGCGAAACAACTCCTTAAGCGGTTATTTACAACCCGAGAGCTTCACGAAGCTGAAATATCTTGAGGTTCTTGATTTGAGTTACAACAATTTCAGTGGCTCAGTCCCTTTCAGTCTCTTTCAGATTCCCTCACTGGAGCAACTAACACTCTCTTTCAACAAATTCTCTTCCATGAACTTAGCGTCACGTTACGCATTGGACTACTTGCAAAGCGGACTCATAGCGGTTGATCTGAGCAACAACGAGATTGAGGGGTTCTTGCCGATGTTCTTGGCGATGATGCCGAAGCTTGCATCTTTGTCAATGGAGAACAACAAGTTGAGTGGTATGATACCGACTCAGTTTGCATTGAAGACGGTTTTGCCTGAACCGGGGGTTTCGCCATTTGAGAGGCTTCTGTTGGGAGGGAATTACTTGTTTGGAGGTATACCGAGTCCTCTAATGGCGCTTAAACCGGGTTCTGCAAATGTGAGGCTTGTCGGTAATTGCTTGTATCGGTGTCCTCTTATCTTCTTTTTCTGTCAAGGTGGCAACCAAAAATCGTATCAAGAATGTAAGAGATTCGGACACTTCATCCCTTAG 1293 0.4625 MVSLSFPQFHFHLFLIISGLGVISTVESKTHWGDAQVLKELKNKIDPSSLTPGSCVSSWNFTVDPCDNLFTEKFTCGFRCDSVVSGLSRVTELSLDQAGYSGSLSSIFWNLPYLETLDVSNNYFSGQIPESFSNLTRLSRLSLSRNSFTGEIPSSLGSLSMLEELYLDNNNLEGTIPESFNNGLKTLKRLEIQFNNLNGELPKNFDSLKNLNYLDLSDNGVTGKLPEALPEFLVQISMRNNSLSGYLQPESFTKLKYLEVLDLSYNNFSGSVPFSLFQIPSLEQLTLSFNKFSSMNLASRYALDYLQSGLIAVDLSNNEIEGFLPMFLAMMPKLASLSMENNKLSGMIPTQFALKTVLPEPGVSPFERLLLGGNYLFGGIPSPLMALKPGSANVRLVGNCLYRCPLIFFFCQGGNQKSYQECKRFGHFIP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g00181 430 Gene3D Ribonuclease Inhibitor 200 302 IPR032675 -
Arst1g00181 430 Gene3D Ribonuclease Inhibitor 33 199 IPR032675 -
Arst1g00181 430 Gene3D Ribonuclease Inhibitor 303 402 IPR032675 -
Arst1g00181 430 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Arst1g00181 430 Pfam Leucine rich repeat 239 292 IPR001611 GO:0005515
Arst1g00181 430 SMART LRR_typ_2 159 182 IPR003591 -
Arst1g00181 430 SMART LRR_typ_2 135 158 IPR003591 -
Arst1g00181 430 SMART LRR_typ_2 111 134 IPR003591 -
Arst1g00181 430 SMART LRR_typ_2 331 354 IPR003591 -
Arst1g00181 430 SMART LRR_typ_2 208 232 IPR003591 -
Arst1g00181 430 SMART LRR_typ_2 255 279 IPR003591 -
Arst1g00181 430 Pfam Leucine Rich repeat 209 223 IPR001611 GO:0005515
Arst1g00181 430 FunFam Piriformospora indica-insensitive protein 2 104 203 - -
Arst1g00181 430 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 20 423 - -
Arst1g00181 430 SUPERFAMILY L domain-like 70 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g00181 Arst-Chr1 1650299 1651873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g00181 64 384 Receptor kinase-like Gene Family AT1G08590 33.531 3.88e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g00181 - - adu:107478747 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00181 1 1650299 1651873 Arst1g00181 1 1650299 1651873 ECH
Arst1g00181 1 1650299 1651873 Arst5g01101 5 10923974 10925511 ECH
Arst5g01101 5 10923974 10925511 Arst1g00181 1 1650299 1651873 PCT