Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00818 ATGGACGTGGGATCAACCGGAGACACCTCCACCGACTATTTCTCACCGGATGGCGCCATATCACGATGGAAATTCACGGTGTCGAGGCAGTACCAACATTTCCTCGACAAGACCACGCCGCACATGCTCCGCCGCTGGATTGGTTCCTTGATCATCGCTTGCATCTACGTTCTGCGCGTATACTTGATCCAAGGCTTCTACGTCGTCTCCTACGGCCTCGGAATCTACATGCTCAACCTCCTCATCGGCTTCCTTTCCCCTCAGGTTGATCCCGAAATTCAGGAACTCTACGACGGTGCCACTCTCCCCACCAGGGGCTCCGATGAGTTCCGTCCCTTCGTTCGCCGTCTCCCTGAGTTCAAGTTCTGGTATTCAATCACGAAGGCATTTTGCATTGCCTTTGTGATGACTTTCTTTAGTGTGTTTGATGTTCCAGTGTTTTGGCCAATACTCCTTTTCTACTGGGTAGTCTTATTCACACTTACCATGAGAAGACAGATATCACATATGATCAAATACAAATATGTGCCATTCTCATTCGGGAAACAGCGCTATGATGGAAAGAAAGCATCGGCTGAAAGCGCAGGCCATTCAATGGACTAA 603 0.4942 MDVGSTGDTSTDYFSPDGAISRWKFTVSRQYQHFLDKTTPHMLRRWIGSLIIACIYVLRVYLIQGFYVVSYGLGIYMLNLLIGFLSPQVDPEIQELYDGATLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGKKASAESAGHSMD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00818 200 PIRSF AtER_Rer1p 6 196 IPR004932 GO:0016020
Arst5g00818 200 PANTHER PROTEIN RER1 10 192 IPR004932 GO:0016020
Arst5g00818 200 Pfam Rer1 family 24 185 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00818 Arst-Chr5 7241928 7243775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00818 29 198 Miscellaneous Gene Families AT2G21600 77.059 7.32e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00818 - - ahf:112799570 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00818 5 7241928 7243775 Arst5g00818 5 7241928 7243775 ECH
Arst5g00818 5 7241928 7243775 Arst1g01388 1 15472178 15474420 PCT