Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01388 ATTGGGTTTCTTTCCCCTCAGGTCGATCCCGAGATTCAATCACTCTCAGAGGGACCCACTTTGCCAACAAGAAGCAACGATGAGTTCCGTCCCTTCGTTCGTCGCCTCCCAGAGTTCAAGTTCTGGTACTCAATAACAAAGGCTTTTTGCATTGCGTTTGTGATGACATTTTTTAGTGCATTTGATGTTCCAGTGTTCTGGCCAATACTCCTATTCTATTGGGTGGTCCTATTTACACTTACTATGAGGAGACAGATATCACACATGATCAAATACAAATATGTACCGTTCACATTGGGCAAACAGCGCTATAATGGGAAGAGAGCATCAGCAGAAAGCGCAAGCCTTTCAGAGGACTGA 360 0.4444 MDAGSTAPSSSSAASAAAAAAATATATTSMEDFQTPAAAISRWKFEVSRQYQHLLDKTTPHVLNRWLGTLAVAFVYALRVYLIQGFYVVSYGLGIHLLNLLIGFLSPQVDPEIQSLSEGPTLPTRSNDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFTLGKQRYNGKRASAESASLSED 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01388 220 PIRSF AtER_Rer1p 26 216 IPR004932 GO:0016020
Arst1g01388 220 PANTHER PROTEIN RER1 28 212 IPR004932 GO:0016020
Arst1g01388 220 Pfam Rer1 family 44 206 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01388 Arst-Chr1 15472178 15474420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01388 29 216 Miscellaneous Gene Families AT4G39220 67.553 2.23e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01388 - - ahf:112799570 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01388 1 15472178 15474420 Arst1g01388 1 15472178 15474420 ECH
Arst5g00818 5 7241928 7243775 Arst1g01388 1 15472178 15474420 PCT