Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00444 ATGGCGTCGACAGCACGATCTTCCTCCACGCTCCTCAAGCGATTCCTGGCCACGCGCATCAACCAGTCCCGCTCCGTTACCTATATGCCCCGTCCCGGAGACGGCGCCCCGCGCGCCGTCACACTGATTCCCGGCGATGGGATCGGTCCTCTAGTCACCGGCGCCGTTGAGCAGGTGATGGAGGCGATTCACGCGCCGGTGTACTTCGAGAAGTTCGAGGTCCACGGCGACATGAAGGCGGTGCCGCCGGCGGTGATTGAGTCGATCCGGAAGAACAAGGTGTGCCTCAAGGGAGGACTCGCGACGCCGATGGGCGGCGGTGTGAGCTCACTGAACGTGCAGCTGAGGAAGGAGCTCGACCTCTACGCTTCACTCGTCAACTGTTTCAACCTCCCTGGTATTACCACGCGCCACAACAACGTCGACATCGTCGTAATCAGGGAGAACACCGAAGGCGAGTACTCCGGCCTCGAGCACGAGGTCGTCCCGGGCGTCGTTGAAAGCCTCAAGGTAATAACGAAGTTCTGTTCGGAGCGCATTGCTAAATATGCTTTCGAGTATGCTTACCTTAATAACAGAAAGAAAGTGACTGCTGTGCACAAAGCAAACATTATGAAGCTTGCAGATGGTTTATTCTTGGAATCTTGTCGGGAGGTTGCAACAAAGTATCCCGGAATCAAGTATAACGAAATTATTGTAGATAACTGCTGCATGCAGCTTGTATCAAAGCCTGAGCAGTTTGATGTCATGGTGACCCCCAATCTGTATGGAAATCTCGTTGCAAATACAGCAGCAGGTATTGCTGGAGGTACTGGTGTCATGCCAGGAGGAAATGTTGGGGCTGAGCATGCTGTGTTTGAGCAAGGTGCTTCAGCTGGGAATGTTGGCAGTGGGAAGGAAGTGGAAGAGAAGAAAGCCAACCCTGTGGCACTGCTTCTTTCGTCAGCCATGATGCTGAGACACCTCCAGTTTCCTGCATTTGCTGACAGACTGGAAACTGCGGTGAAACGTGTAATTCTAGAGGGTCAATGCCGGACACATGACCTTGGAGGGACAAGCACCACTCAAGAGGTTGTTGATGCTGTGTTAGATGCTTTAAACTGA 1104 0.5335 MASTARSSSTLLKRFLATRINQSRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVEQVMEAIHAPVYFEKFEVHGDMKAVPPAVIESIRKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGITTRHNNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGSGKEVEEKKANPVALLLSSAMMLRHLQFPAFADRLETAVKRVILEGQCRTHDLGGTSTTQEVVDAVLDALN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00444 367 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 27 366 - -
Arst5g00444 367 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 39 366 - -
Arst5g00444 367 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 26 366 - -
Arst5g00444 367 NCBIfam isocitrate dehydrogenase (NAD(+)) 36 365 IPR004434 GO:0006099
Arst5g00444 367 Pfam Isocitrate/isopropylmalate dehydrogenase 40 362 IPR024084 -
Arst5g00444 367 Gene3D Isopropylmalate Dehydrogenase 25 365 - -
Arst5g00444 367 SMART Iso_dh_2 39 362 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00444 Arst-Chr5 3756454 3760234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00444 K00030 - gmx:100778831 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00444 5 3756454 3760234 Arst5g00444 5 3756454 3760234 ECH
Arst5g00444 5 3756454 3760234 Arst1g01136 1 11218268 11220826 PCT