Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01136 ATGACAACCGCAAGATCCATCATCCCACTCCTCAACCGCCTCATCTCCAGATCTCAACCGTCCAGATCCGTAACCTACATGCACCGTCCCGGCGATGGCTCCCCTCGCCCGGTAACCCTCATACCGGGAGACGGCGTCGGGCCTCTGGTCACCGACGCCGTGGAACAGGTCATGGAGGCCATGCACGCTCCGGTGTACTTCGAGAAATTCGAAGTGCACGGGACCATGAAGAAGTTTCCAGAAGAGGTTCTGGATTCGATTCGAAAGAACAAGGTGTGCATCAAGGGAGGTCTGGCCACGCCGATGGGCGGTGGCGTGAACTCCCTGAACGTGTATCTAAGGAAGGAGCTTGATCTCTACGCTTCGTTGGTGAATTGCTTCAATATGAGAGGGTTGCCGACGAGGCATGAAAATGTGGACATTGTTGTGATTAGAGAGAACACTGAAGGTGAATATGCTGGCCTTGAACATGAGGTTGTGCCTGGTGTTGTTGAAAGTCTTAAGTTCTGTTCGGAGAGAATAGCATCATATGCATTCGAGTATGCGTATCTGAACAACAGAAAGAAGGTGACAGCGGTGCACAAAGCAAACATAATGAAGCTAGCAGATGGTCTGTTCTTGGAAGCATGCAGAGAGGTTGCACAAAAGTATCCTGCAATCCAATACAATGAAATCATTGTTGATAATTGTTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTGACTCCCAATCTTTATGGAAATCTAGTTGCAAATACTGCAGCAGGCATTTGTGGAGGCACAGGAGTCATGCCTGGAGGTAATGTTGGTGCTGAACATGCTGTGTTTGAGCAAGGAGCTTCAGCTGGAAATGTTGGAAAGGATTCAATTGTTGCACAAAAAACAGCAAACCCAGTTGCACTTCTTCTCTCTTCTGCAATGATGCTTAGGCATCTTCAGTTTCCTGCATTTGCTGACAGATTAGAAACTGCTGTTCAAAAAGTCATTCTTCAAGCAAAAGTCAGAACAAAGGATCTTGGAGGATCAAGTACCACCCAAGAGGTTGTTGATGCAGTAATAGATGCTTTAGATTAA 1086 0.4724 MTTARSIIPLLNRLISRSQPSRSVTYMHRPGDGSPRPVTLIPGDGVGPLVTDAVEQVMEAMHAPVYFEKFEVHGTMKKFPEEVLDSIRKNKVCIKGGLATPMGGGVNSLNVYLRKELDLYASLVNCFNMRGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKFCSERIASYAFEYAYLNNRKKVTAVHKANIMKLADGLFLEACREVAQKYPAIQYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGICGGTGVMPGGNVGAEHAVFEQGASAGNVGKDSIVAQKTANPVALLLSSAMMLRHLQFPAFADRLETAVQKVILQAKVRTKDLGGSSTTQEVVDAVIDALD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01136 361 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 25 360 - -
Arst1g01136 361 Gene3D Isopropylmalate Dehydrogenase 19 360 - -
Arst1g01136 361 Pfam Isocitrate/isopropylmalate dehydrogenase 38 356 IPR024084 -
Arst1g01136 361 NCBIfam isocitrate dehydrogenase (NAD(+)) 35 359 IPR004434 GO:0006099
Arst1g01136 361 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 28 360 - -
Arst1g01136 361 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 36 360 - -
Arst1g01136 361 SMART Iso_dh_2 37 356 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01136 Arst-Chr1 11218268 11220826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01136 K00030 - gmx:100777867 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01136 1 11218268 11220826 Arst1g01136 1 11218268 11220826 ECH
Arst5g00444 5 3756454 3760234 Arst1g01136 1 11218268 11220826 PCT