Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00420 ATGTTTGTGAAGAAGTTTGTAGAGAAAGCATCCACAAAGAAGGGTAGCGGAAATTCATTAGATGGCTTAAAAGCTAAAGATGTGGATCTACGGCTGGTATTTCATCAAGGGCTACCATCCTGTGGTGCCAAATTTGCCTATGATCACATTCACAAGACACTTGCTATTTCTACCAGGGATGGACGAATTAAACTGTTTGGAAAAGATAATGCACAAGTGCTACTTGAGTCCACTGATGCAGTGCCTAGCAAATTCTTACAGTTCATCCATAACCATGGCATCCTCATAAATGTCACTGTCAATAACTATATTGAGGTATGGGACATAGAAAAGAAGCTGATGTCTGATGTTTACATTGTTAAAGAAGAAATCACTTGCTTTTCAGTCATTCAGCATAGCCTTTACATGTATATAGGAGTCTCTAATGGTAATATATCAGTATTGAAGCTTGATCAAGAACCATGGCACATGGTTAAAATGAAATACACCATACCCCTCTCTGTCTCTTATGGGAATTCAGCTGAAATGGCTGAAGATATTGTTGTGACACACATACTGCCTCAACCCTTTGCTGAAAGCAAGAGAGTTCTTATAATCTTTAGAAATGGACAGATGGTATTGTGGGGCATTCGAGAAAGCCGGTCCGTTTTCAGAACCGGTGGAAACATGTCGCAGCAATTGTACGGCGAAACAAAGAAGGTGTCTTCTGCTTGTTGGGTGTGTCCTTATGGAACCAAGGTGGTTGTAGGCTACAACAATGGAGAGATCTACATTTGGGGAATTCCTTCTCTTAACAAAGGAAATGTTCCAACAATTGATTATAGCAGCATTCAAAACACTCCTATTTTCAAGCTTAACTTGGGATACAAGTCAGACAAAACATCTATAGGATCTCTCAAATGGACTTATGCCGAAGGAAAGGCGAGCCGATTATATGTCATGGGAGCTTCCGAATATGCATCTTCAAATTCTGTGCAGGTGGTGTTGTTGAATGAACAAATCGAATCTAGAACAACTAAGTTGGGACTTCATTTGTCTGAAAGTTGTATTGACATGGAGATCATCTCAACCTCAATTGACCAAAACAAGCATAAACAAAGTTCTTTCCTTTTGCTTGGAAAATCAGGCCATGTATATGTGTATGATGATAGTTTGATTGAAAGATATCTACTGCAAAACCAATCTAAGTCAAGTTCCACATTGCCAAAGGAAATGGTTGTAAAGTTACCAATGGCAGATTCAAGCATCACGACAGCAAAATTCATCTGCAACAATACTAGTATGTTAAATTCTGGAGACGAGTATTATAGTCAGAAGATAAAAAACTATCCACCCCTTATTCCCATAGAAGCAAGCTACAAAGATGGGATAAACCTTAGTTCTGCCAACTTCAATGGATTTTCAAGTGTAAAAAATTTGTATATAACTGGACACAGCAATGGAGCCATAACTTTTTGGGATGCATCATGTCCCTACTTCACCCCAATTTTGCAATTAAAGCAACAGAGTGAAAATGATTTTTCTTTGAGTGGTATACCATTGACGGCATTATATTTCAATATCAACTCTCCTCTCCTTGTTTCTGGTGACCAGAGTGGAATGGTTCGGATATTTAGATTCAAACCAGAACCATATGCCTCCAGCTTCCTATCTCTCACTGGAGGTTCAAAGAAAGGGACTGATCATGTGATCCAAAGCATGAAACTTGTAAAGACTACTGGTGCTGTGCTTTGTATGAACATGGATCACTATTCAAAGCATCTTGCCGTTGGTTCTGATCAAGGAAATGTTTCAATCATTGTCATAGATGGCCCTTGTGTATTATATCAGAAAAATATAGCAAGTGAAATTTCTACTGGTATAATCTCCCTGCAGTTTGTGACCTGCAGTTTGCATGGTTTTGAGAAAAATGTATTAGCAGTCGGAACAAGAGACTCGTCTGTTCTGGCATTAGATAGCGAAACTGGAAACACGCTCAGTGCCGAAACAGTTCATCCTAAGAAGCCCTCCAGAGCTTTATTCATGCAGGTGTTGGGATCAATTACAGAAGATGGCCTGGACTTGAGAGAAGGGAATCATGTTGGGGATGCAACAACAAAGCAGTTGTATATTTTGCTGTGTTCTGAGAAGGCTGCATATGTGTATTCTTTCGTCCATGCTACGCAGGGAGTTAAAAGGGTGCTTTACAAGAAGAAGTTTCATTCCTCCTCCTGTTGTTGGGCTTCAACATTTTACAGCTCCTCTAATATTGGCCTTGTGCTCCTTTTCACCAGTGGCAAAGTAGAATTAAGGTCTTTGCCTGAGTTATCTCTGATAGAGGATGCTTCAATAAGAGGTTTCACTTATTCATCTCCAAAACTGAAGTCGCTTTCCGACTCCCAGATATGTTGTTCATCCAAAGGAGATATTGTTGTGGTGAATGGTGACCAGGAAATTTTTGTTGTCTCATTGTTAGTCCACAGGAATATTTTCCGACTGTTGGACTCTGTTACCTGCATTGAAAGGAATGAAAGGATGCCATCACAAGAAGAGCTCGCTCCTAGTCCTGTTTCCCAAAAGGAAAAGAAGAAGGGTATATTCAGCTTAGTTATGAAAGAATTTACCGGAAGTAAAGAAAAGGATGTGCCCTCCATGGAAAAAGAAGATCCAAGAGAAAGTATCCGCGAACTCTCAGCAATACTTTCAAATGCAAATTTTCCAAGTGATGCTGACAATAGTGATAACTGGACCATGCATGAAGATGAGCCTGAATTAACATTAGATGACATTCATCTAGATGATCATGTAGAAAAACGAAAAGAACAAAGCATATTAGGAGCTCTTAATAAGAAGAAATTGGCTGGCAAATTGAATGCTTTCAAAGGAAGATTGAAAGAGAAGAAGGGCAACAATCAGAAAACACCAGATAACAATAAGGAAGAGCCACAAGATGAGAAAGCTGGTGCAGTTGATCAAATTAAGAAGAAATATGGATTTTCTTCCTCTTCTTCGTCATCATCCCGTGAAACAGGCACGAGCGTTGTAAGCATTGCTAAATCGGCACAAGGCAGATTGCAGGACAACACCAGGAAACTGCAGGATATCAACCTACGAGCAACAGAGATGCAAGATACAGCAAAATCATTTTCATCATTGGCAAAACAAGTGCTACGAACTGCTGAACAGGATAGACGAAATATATAA 3183 0.3959 MFVKKFVEKASTKKGSGNSLDGLKAKDVDLRLVFHQGLPSCGAKFAYDHIHKTLAISTRDGRIKLFGKDNAQVLLESTDAVPSKFLQFIHNHGILINVTVNNYIEVWDIEKKLMSDVYIVKEEITCFSVIQHSLYMYIGVSNGNISVLKLDQEPWHMVKMKYTIPLSVSYGNSAEMAEDIVVTHILPQPFAESKRVLIIFRNGQMVLWGIRESRSVFRTGGNMSQQLYGETKKVSSACWVCPYGTKVVVGYNNGEIYIWGIPSLNKGNVPTIDYSSIQNTPIFKLNLGYKSDKTSIGSLKWTYAEGKASRLYVMGASEYASSNSVQVVLLNEQIESRTTKLGLHLSESCIDMEIISTSIDQNKHKQSSFLLLGKSGHVYVYDDSLIERYLLQNQSKSSSTLPKEMVVKLPMADSSITTAKFICNNTSMLNSGDEYYSQKIKNYPPLIPIEASYKDGINLSSANFNGFSSVKNLYITGHSNGAITFWDASCPYFTPILQLKQQSENDFSLSGIPLTALYFNINSPLLVSGDQSGMVRIFRFKPEPYASSFLSLTGGSKKGTDHVIQSMKLVKTTGAVLCMNMDHYSKHLAVGSDQGNVSIIVIDGPCVLYQKNIASEISTGIISLQFVTCSLHGFEKNVLAVGTRDSSVLALDSETGNTLSAETVHPKKPSRALFMQVLGSITEDGLDLREGNHVGDATTKQLYILLCSEKAAYVYSFVHATQGVKRVLYKKKFHSSSCCWASTFYSSSNIGLVLLFTSGKVELRSLPELSLIEDASIRGFTYSSPKLKSLSDSQICCSSKGDIVVVNGDQEIFVVSLLVHRNIFRLLDSVTCIERNERMPSQEELAPSPVSQKEKKKGIFSLVMKEFTGSKEKDVPSMEKEDPRESIRELSAILSNANFPSDADNSDNWTMHEDEPELTLDDIHLDDHVEKRKEQSILGALNKKKLAGKLNAFKGRLKEKKGNNQKTPDNNKEEPQDEKAGAVDQIKKKYGFSSSSSSSSRETGTSVVSIAKSAQGRLQDNTRKLQDINLRATEMQDTAKSFSSLAKQVLRTAEQDRRNI 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00420 1060 MobiDBLite consensus disorder prediction 989 1023 - -
Arst5g00420 1060 FunFam Syntaxin-binding protein 5 isoform A 23 182 - -
Arst5g00420 1060 SUPERFAMILY WD40 repeat-like 46 609 IPR036322 GO:0005515
Arst5g00420 1060 CDD R-SNARE_STXBP5_6 1001 1051 - -
Arst5g00420 1060 Pfam Lethal giant larvae(Lgl) like, C-terminal 718 841 IPR013905 -
Arst5g00420 1060 Gene3D - 304 686 IPR015943 GO:0005515
Arst5g00420 1060 SMART WD40_4 500 539 IPR001680 GO:0005515
Arst5g00420 1060 SMART WD40_4 220 260 IPR001680 GO:0005515
Arst5g00420 1060 SMART WD40_4 560 601 IPR001680 GO:0005515
Arst5g00420 1060 SMART WD40_4 402 487 IPR001680 GO:0005515
Arst5g00420 1060 MobiDBLite consensus disorder prediction 952 1023 - -
Arst5g00420 1060 Gene3D - 43 301 IPR015943 GO:0005515
Arst5g00420 1060 SUPERFAMILY WD40 repeat-like 513 817 IPR036322 GO:0005515
Arst5g00420 1060 MobiDBLite consensus disorder prediction 952 985 - -
Arst5g00420 1060 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 9 1052 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00420 Arst-Chr5 3559201 3567256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00420 - - gmx:100782049 1571.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00420 5 3559201 3567256 Arst5g00420 5 3559201 3567256 ECH
Arst5g00420 5 3559201 3567256 Arst1g01161 1 11396066 11405786 PCT