Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01161 ATGTTACTTCCAATAATCATATTGAGGTACATTGGATATTCTAATGGTAATATTTCAGTGTTGAAGATTGATCAAGAACCTTGGCATATGGTTCAAATGCAGTACACAATACCCCTCTCGGCTTCTTACGGAGATTCTGAAGTGCCTGATGATACTGTTGTGACACATATTCTGCCTCAACCAGCAGCTGAAAGTAAAAGGGTTCTGATAATCTTTAGAAATGGCCAGATAATTTTGTGGGATATTAGAGAAAGCAAAACTGTTTCCAAAACTGGTGGAAACATGTCACAACCACTCCATAGTGAAACAAAGAAAGTTTCTTCTGCATGTTGGTCATGTCCTTTTGGAAGCAAAGTTGTTGTAGGCTACAACAACGGAGAGATCTTCATTTGGAGTATCCCTTCCCTAAACATCGGACGAGACAGTTCTGTATCAGCGCCGGATCATAATACTACACAGAACACTCCTCTTCTTAAAATTAACTTGGGATACAAGTCAGAGAAAATTCCCATAGGATCAATGAAATGGATTTATGCTGAAGGGAAGGCTAGTAGATTATATGTCATGGGAGATTGTGATGATGCATCTTCTTTAAACTCATTGCAGGTAGTGTTATTGAATGATAACATAGAATCTCGCACGATTAAGTTGGGCCTTCATTTGTCTGAAAGTTGTGTTGCCATGGAGCTCATATCAGCAACTTCAAATGAACAAAGCAAGCACAGACAAGAATCTTTGATTCTGATTGGGAAATCAGGCCATATATATCAATATGATGATGGCTTGATTGAAAGATATCTGATACAAAGCCAATCCAAGTCCTCACCCTCACTTCCAAAGGAAGTGACTGTGAAATTACCATTTGCAGATTCAAGCATCACAACTTCAAAATTCATATCCAACACTACCGATGTATTAAACATTGAAGAGGAGTATTATAGAGAGCTGATAAAAAATTATCCACCACTTATTACGGTCGAAACTAATCAAAAGGACGGGTCTACACTGATGAGTTCTGCAAAGTTTACTGGATTCTCAAAAGTTCAAAATCTGTACATAACTGGACACAGCAATGGTGCTCTAAACTTCTGGGATGCTTCATGTCCCCTTTTCATCCCAATTCTGCAGTTAAAGCAACAGAGTGAAAATGATTTTTCTTTAAGTGGCATACCCTTGACAGCATTATTTTTTGATAGCACATATCCTCTTCTTGTTTCTGGTGATCAGAGCGGAACGGTTCGCTTATTTAGATTCAAACCTGAACCATATACTACCAACAGCTTCATGTCTCTTACTGGCGGTTCAAAGAAAGGAACTGATCATATAATCCAGAGTGTAAAAGTTCTGAAGACTAATGGTGCTGTGCTTTCTATGAACATAAATCACAGTTCAACACATCTTGCAGTTGGTTCTGATCAAGGACATGTTTCAGTTTTTAGCATGGATGGACCAACATTGCTGTATCAGAAAAACATTGCTAGCGAAATATCCGCCGGCATTGTCGATCTACACTTCCTAACATGCAGTCTGCAGGGTTTTGAGAAGAACATTCTAGTGGTCGGAACAAAGGACTCATCTATTCTTGCACTTGATAGTGAAACTGGAAACACACTTGGCAATGGAAGTGTTCATCCAAAGAAGCCCTCTAGAGCTCTATTTATGCAGGTGTTGGATGGACAGGGTAACAGTGAGGATGCAACAACAAAGCAATCACATATTCTGCTTTGTTCTGAGAAGGCTTTGTATGTCTATTCATTAGTTCATGCTGTTCAGGGAACAAAAAAGGTGCTCTATAAGAAGAAGTTTCATTCTTCTTCATGTTGCTGGGCATCAACATTTCACAGCAATAATGATATTGGCCTTACGCTCCTTTTCACCAATGGAAAAGTAGAATTAAGGTCTTTGCCGGAATTATCCTTAATTGTGGAGACTTCTATTAGAGGTTTCAACTATTCGCCTCCAAAACTTGGATCATTTTCTGACATCCAGATGTGTTGTTCATCAAGAGGAGATCTTGTTTTGGTTAGTGGTGATCAAGAAATTCTTGTGTTCTCAGCATTGGTCCAAAGAAAAATTTTCAGGCTTTTGGATTCTGTCAGCACCATCTACAGCAAAGAAAGGATGGCATCACAAGAAGAGCTTGTCCCTAGCCAAGCCATTTATAAGGAAAAGAAAAAGGGAATATTCAGCTCAGTTATCAAAGATCTCACCGGTGGTAAAGAAAAGCATGCCCTGATTCCGGAAACAGAAGATTCTAAAGAGAGTATCCAGGAACTCTCAGTGATCTTTTCGAATCCGAATTTTCCTTCTGAGGCAGATAATAATGATAACCTGACTGCTGATGAAGATGATCTTGATCTAAATATAGATGACATTGACATAGATGATCATGAAGAAAAACACAGAGAACAAAACAAATTGGGATTGGGAGCTCTTAACAAGAAGAAATTGGCTGGAAAGTTTCATGCTCTAAAAGGTAAGTTGAAAGAGATGAAGGGAAACATTCACAAAACATCAGCAAAGGAAGATCAACAAGAAGAGCAAGCCGGAACAGTTGATCAAATTAAGAAAAAATATGGATTCTCTTCTTATTCTTGTTCCAATGAAACAAGTGCTGCTAAACTGTCGGAAAGCAAGCTGCGTGAGAACTTGAACAAACTGCAGGGCATTAATGTTAAAACTGCAGAAATGCAAGACACAGCAAAGTCATTTTCATCATTGGCAAATCAAGTGCTCCGAACAGCAGAACAAGATAGACGAAGTTCATAA 2769 0.3871 MLLPIIILRYIGYSNGNISVLKIDQEPWHMVQMQYTIPLSASYGDSEVPDDTVVTHILPQPAAESKRVLIIFRNGQIILWDIRESKTVSKTGGNMSQPLHSETKKVSSACWSCPFGSKVVVGYNNGEIFIWSIPSLNIGRDSSVSAPDHNTTQNTPLLKINLGYKSEKIPIGSMKWIYAEGKASRLYVMGDCDDASSLNSLQVVLLNDNIESRTIKLGLHLSESCVAMELISATSNEQSKHRQESLILIGKSGHIYQYDDGLIERYLIQSQSKSSPSLPKEVTVKLPFADSSITTSKFISNTTDVLNIEEEYYRELIKNYPPLITVETNQKDGSTLMSSAKFTGFSKVQNLYITGHSNGALNFWDASCPLFIPILQLKQQSENDFSLSGIPLTALFFDSTYPLLVSGDQSGTVRLFRFKPEPYTTNSFMSLTGGSKKGTDHIIQSVKVLKTNGAVLSMNINHSSTHLAVGSDQGHVSVFSMDGPTLLYQKNIASEISAGIVDLHFLTCSLQGFEKNILVVGTKDSSILALDSETGNTLGNGSVHPKKPSRALFMQVLDGQGNSEDATTKQSHILLCSEKALYVYSLVHAVQGTKKVLYKKKFHSSSCCWASTFHSNNDIGLTLLFTNGKVELRSLPELSLIVETSIRGFNYSPPKLGSFSDIQMCCSSRGDLVLVSGDQEILVFSALVQRKIFRLLDSVSTIYSKERMASQEELVPSQAIYKEKKKGIFSSVIKDLTGGKEKHALIPETEDSKESIQELSVIFSNPNFPSEADNNDNLTADEDDLDLNIDDIDIDDHEEKHREQNKLGLGALNKKKLAGKFHALKGKLKEMKGNIHKTSAKEDQQEEQAGTVDQIKKKYGFSSYSCSNETSAAKLSESKLRENLNKLQGINVKTAEMQDTAKSFSSLANQVLRTAEQDRRSS 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01161 922 SUPERFAMILY WD40 repeat-like 65 618 IPR036322 GO:0005515
Arst1g01161 922 SMART WD40_4 92 132 IPR001680 GO:0005515
Arst1g01161 922 SMART WD40_4 378 417 IPR001680 GO:0005515
Arst1g01161 922 SMART WD40_4 442 480 IPR001680 GO:0005515
Arst1g01161 922 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 10 914 - -
Arst1g01161 922 Coils Coil 828 848 - -
Arst1g01161 922 CDD R-SNARE_STXBP5_6 854 913 - -
Arst1g01161 922 Gene3D - 48 384 IPR015943 GO:0005515
Arst1g01161 922 Gene3D - 388 704 IPR015943 GO:0005515
Arst1g01161 922 Pfam Lethal giant larvae(Lgl) like, C-terminal 573 703 IPR013905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01161 Arst-Chr1 11396066 11405786 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01161 - - gmx:100811900 1332.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01161 1 11396066 11405786 Arst1g01161 1 11396066 11405786 ECH
Arst5g00420 5 3559201 3567256 Arst1g01161 1 11396066 11405786 PCT