Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03318 ATGGGTCTTGCTGAAAATCAGCTTTGCTTCGATCTTATTGAAGAGTGGATAAGGAACAATTCCAAAGCTTCCATATGCACTGCTGAAGGAGTGCATCTGTTTAGAGATATTGCTAACTTTCAAGACTACCATGGATTGCCACAGTTCAGAAAAGGTGTGGCGAATTTCATGTCAAAAGCAAGGGGTGGTAGGGTCAAATATGATCCTGAGCGTATATTGATGAGTGGAGGAGCAACAGGTGCAAATGAATTAATAATGTTTTGTTTGGCTGATCCTGCTGATGCATTCATGGTTCCCACTCCTTATTATCCAGCATTCGTGCGTGATCTTGGTTGGAGAACTGGGGTGCAACTTGTTCCTGTTCATTGTGATAGTTCTAACAACTTCAAAATAACAAGAGAAGCCCTTGAAGAAGCTTATCGTGAAGCAAAACAAAACAACATCAATGTGAAGGGTTTGATCATAACAAACCCTTCAAACCCTTTGGGAACCACATTGGACAAAGAAACCCTCAAAAGTATTGTGAGGTTCATCAATGAGAAGAACATTCACTTGGTTTGTGATGAAATTTATGCCGCCACTGTTTTCACCACTCCAAGATTTGTGAGTATCTCTGAAGTCATGCTAGAAATGGAGTGCAAGAAAGAACTCATTCACATAATCTATAGTTTATCAAAGGATATGGGGTTACCGGGTTTTAGGGTTGGCATTGTTTATTCCTACAATGATGATGTTGTGAGTTGCGGCCGCAAAATGTCGAGTTTCGGATTAGTCTCTTCTCAGACTCAACATTTTCTAGCATCGTTACTTTCTGACGAGGATTTTATCGACAGATATTTAGAAATTAGCAAAAGGAGGCTCGCAAAGCGTCATAGTTTCTTCACAAAAGGGCTCGAAACGGTTAACATTACTTGCTTGCCAAGCAATTCAGGACTATTTTGTTGGATGAACTTGAGGAGGCTATTGAAGGAGAAAACTTTTGAAGGTGAAATGAAGCTTTGGCGTATGATCATCAATGAGGTGAAGCTCAATGTTTCACCGGGGTCAAGTTTCAATTGTTCTGAGCCTGGTTGGTTTAGGGTTTGCTTTGCTAACATGGATGATGAGACTGTGGAGGTTGCATTGAAAAGGATTAGGGCTTTTGTTGGGAGAGAAACTAATAATGGAAAAAGGGTTGAACTCAAACGTTGGAAAAGCATTAATACTAATAAGTTAAGGCTAAGCTTCAACTCTAGAAGGTTTGATGAGAATGTTATGTCACCTCATTCACCAATGCCTCACTCACCCCTTGTTCGTGCCACTTAA 1305 0.4038 MGLAENQLCFDLIEEWIRNNSKASICTAEGVHLFRDIANFQDYHGLPQFRKGVANFMSKARGGRVKYDPERILMSGGATGANELIMFCLADPADAFMVPTPYYPAFVRDLGWRTGVQLVPVHCDSSNNFKITREALEEAYREAKQNNINVKGLIITNPSNPLGTTLDKETLKSIVRFINEKNIHLVCDEIYAATVFTTPRFVSISEVMLEMECKKELIHIIYSLSKDMGLPGFRVGIVYSYNDDVVSCGRKMSSFGLVSSQTQHFLASLLSDEDFIDRYLEISKRRLAKRHSFFTKGLETVNITCLPSNSGLFCWMNLRRLLKEKTFEGEMKLWRMIINEVKLNVSPGSSFNCSEPGWFRVCFANMDDETVEVALKRIRAFVGRETNNGKRVELKRWKSINTNKLRLSFNSRRFDENVMSPHSPMPHSPLVRAT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03318 434 Pfam Aminotransferase class I and II 1 378 IPR004839 GO:0009058|GO:0030170
Arst4g03318 434 Gene3D - 21 272 IPR015421 GO:0003824
Arst4g03318 434 Gene3D Aspartate Aminotransferase, domain 1 1 377 IPR015422 GO:0003824
Arst4g03318 434 Coils Coil 126 153 - -
Arst4g03318 434 CDD AAT_like 39 380 - -
Arst4g03318 434 SUPERFAMILY PLP-dependent transferases 1 383 IPR015424 -
Arst4g03318 434 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 382 - -
Arst4g03318 434 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 223 236 IPR004838 GO:0003824|GO:0009058|GO:0030170
Arst4g03318 434 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 1 27 - -
Arst4g03318 434 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 183 206 - -
Arst4g03318 434 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 34 50 - -
Arst4g03318 434 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 71 91 - -
Arst4g03318 434 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 93 114 - -
Arst4g03318 434 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 217 241 - -
Arst4g03318 434 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 147 171 - -
Arst4g03318 434 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 249 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03318 Arst-Chr4 111183211 111187417 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03318 K20772 - gmx:100775969 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03318 4 111183211 111187417 Arst4g03318 4 111183211 111187417 ECH
Arst4g03318 4 111183211 111187417 Arst2g00301 2 2701862 2706027 PCT