LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g00301	ATGGTGGGTTTGAGTTCTAAGAGCTATGAGCTTCTATCAAAGATTGCAACAAATGAGAAACATGGAGAGAACTCTCCTTACTTTGATGGATGGAAAGCTTATGATAGAGATCCATATCACCCTACAAAAAACCCTCAAGGTGTTATTCAAATGGGTCTTGCTGAAAACCAGCTATGCTTTGATCTCATTGAAGAGTGGTTAAAGAAGAATCCCAAGGCTTCCATTTGCACTCCTGAAGGACTTCATCAATTCAGAGATATTGCCAACTTTCAAGACTATCATGGATTACCACAGTTCACAAGTGCTGTGGCAAAGTTTATGTCAAAAGTGAGAGGTGGTAGGGTCAAGTTTGATCCAAACCGTATATTGATGAGTGGAGGGGCAACAGGTGCAAATGAATTAATCATGTTCTGCTTAGCTGATCCTGGAGATGCTTTTCTTGTTCCTACCCCTTATTATGCAGCATATCCGCGGGATTTGTGTTGGCGAACCGGATTACGGTTGATTCCGGTTCATTGTGATAGCTCCAACAATTTCAAGATCACAAGAGAAGCTCTTGAATCATCATACAAAAAAGCCAAAGATGATAACATCAATGTGAAGGGTTTGATCATAACAAACCCTTCAAACCCTTTGGGAACATCTTTAGACCGTGACACATTGAAGAGCCTAGTGAATTTCACCAATGATAACAACATACATTTGGTGTGTGATGAAATCTATTCAGCCACGGTTTTCGATTCCCCACGGTTTGTAAGTGTTGCCGAAATCATTGAAGAAATGGATGACTCATCATGCAAAAAAGAACTTATTCACATAGTTTATAGCCTATCCAAGGACATGGGATTCCCCGGATTTAGGGTTGGGATAGTTTATTCGTACAACGATATAGTCGTAAATTGCGGTCGCAAAATGTCGAGTTTTGGATTAGTCTCTTCCCAGACTCAACATATGCTGGCCGCAATGCTTTCAGACGACGAATTTGTGGATAATTTTCTTAAGGAAAGTTCTAGAAGACTGGCGAAACGGCACGAGTACTTCTCAAAGGGGCTAGAAGAAGTTAACATCAAAAGGTTTCCGAGCAATGCCGGATTATTCTATTGGATGAATCTGAGTTCATTGTTGAAAGAACAAAGCTTTGAAGCCGAAATGGCGCTATGGCGCGTGATTATCAACGAAGTGAAACTCAATGTTTCTCCGGGATCATCTTTCAATTGCTTGGAACCAGGTTGGTTTAGGGTTTGTTTTGCAAACATGGATGATGAAACGGTTGAAGTTGCACTGAATAGAATAAGAGCATTTGTGATTGGGAAAGAGAAAACAACAAAGAATAATAATAATAGGGCAAAGAAAAACAACAACGTTGTTGAAGTGAAAAAACGTTGGCAACAGAATCTTAGGTTAAGTTTCTCTTCATCAAGATTGTTGGATCATCATGAAACTGTTATGTCACCTCACATTTTGTCTCCACATTCACCAATTCCAGCTTCATCACCACTTGTTCAAGCAACATAA	1515	0.3987	MVGLSSKSYELLSKIATNEKHGENSPYFDGWKAYDRDPYHPTKNPQGVIQMGLAENQLCFDLIEEWLKKNPKASICTPEGLHQFRDIANFQDYHGLPQFTSAVAKFMSKVRGGRVKFDPNRILMSGGATGANELIMFCLADPGDAFLVPTPYYAAYPRDLCWRTGLRLIPVHCDSSNNFKITREALESSYKKAKDDNINVKGLIITNPSNPLGTSLDRDTLKSLVNFTNDNNIHLVCDEIYSATVFDSPRFVSVAEIIEEMDDSSCKKELIHIVYSLSKDMGFPGFRVGIVYSYNDIVVNCGRKMSSFGLVSSQTQHMLAAMLSDDEFVDNFLKESSRRLAKRHEYFSKGLEEVNIKRFPSNAGLFYWMNLSSLLKEQSFEAEMALWRVIINEVKLNVSPGSSFNCLEPGWFRVCFANMDDETVEVALNRIRAFVIGKEKTTKNNNNRAKKNNNVVEVKKRWQQNLRLSFSSSRLLDHHETVMSPHILSPHSPIPASSPLVQAT	504

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g00301	504	Gene3D	Aspartate Aminotransferase, domain 1	37	430	IPR015422	GO:0003824
	Arst2g00301	504	ProSitePatterns	Aminotransferases class-I pyridoxal-phosphate attachment site.	276	289	IPR004838	GO:0003824\|GO:0009058\|GO:0030170
	Arst2g00301	504	PANTHER	BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED	12	436	-	-
	Arst2g00301	504	CDD	AAT_like	89	433	-	-
	Arst2g00301	504	SUPERFAMILY	PLP-dependent transferases	17	435	IPR015424	-
	Arst2g00301	504	Pfam	Aminotransferase class I and II	49	431	IPR004839	GO:0009058\|GO:0030170
	Arst2g00301	504	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	121	141	-	-
	Arst2g00301	504	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	302	325	-	-
	Arst2g00301	504	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	143	164	-	-
	Arst2g00301	504	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	233	256	-	-
	Arst2g00301	504	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	84	100	-	-
	Arst2g00301	504	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	270	294	-	-
	Arst2g00301	504	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	51	77	-	-
	Arst2g00301	504	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	197	221	-	-
	Arst2g00301	504	Gene3D	-	71	325	IPR015421	GO:0003824

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g00301	Arst-Chr2	2701862	2706027	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g00301	K20772		-	gmx:100813347	762.296

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst2g00301	2	2701862	2706027	Arst2g00301	2	2701862	2706027	ECH
	Arst4g03318	4	111183211	111187417	Arst2g00301	2	2701862	2706027	PCT