Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01733 ATGCCGCCGGCTCTGATGAACCCGCTGATGCCGCCGCCGCCACCTCCGTCGGTGTCGGTGTCCGCGCCGCCGGAGCTTGAAGGCTTCGACGATGTTTCCGGGAGATCGGTGACTCAAAATAGGCGATTCGGTGATCTGAGAGGGTTGCAGTGGCGTGTTGATCTTGGGGTTTTGCCTTCAGAGTCTTCAACTTCCATTGATGATCTTCGTAGGGTCACCGCTAACTGTAGAAGGAGGTATGCGAATCTGAGAAGGCGTCTTCTGGTTGAACCGCATATCCCGAAGGATGGAAGTAACTCACCCGATCTTACCATGGATAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCGGAGCTAGAGAGAATGGTTGATCAGGATTTATCACGTTTATATCCAGAACATGGGAATTATTTCCAGACACCAGGATGTCAAGGCATTTTAAGACGCATTTTATTACTTTGGTGTCTCAGGCACCCAGAATGTGGTTATAGACAAGGAATGCACGAGTTACTTGCTCCTCTGCTTTATGTTCTCCAAGTTGATGTGGAGCGTCTTTCAGAAGTTCGAAAGCTTTATGAAGATATCTTCACCGACAAATTTGATGGCCTTCTATATCAGGAGAATGATCTTTCTTACAGCTTTGATTTTAGAAAATCTCAAGACTTGCTGGAGGATGAAATTGGCTCTCATGGAAATGCAAAAGTCAAAAGTCTTGATGAGCTTGATCCTGCATTACAGACCATTGTATTGCTGAGTGATGCTTATGGAGCTGAAGGTGAACTGGGCATTGTTTTATCTGAGAAATTCATGGAACATGATGCTTATTGCATGTTTGATGCTTTAATGAGTGGTGTCCGTGGTTCAGTTGCGATGGCCGATTTCTTCTCTTCCTTCCCTGTAGCAGGGTCGCAAACTGGCCTGCCTCCTGTTATTGAAGCTTCTACTGCATTGTATCATTTGCTGTGTCTTGTGGATTCATCTCTGTATAGCCATCTTTTGGATCTTGGTGTTGAACCCCAATACTTTTCTCTCCGATGGTTGCGAGTTCTATTCGGACGTGAGTTTTCACTTGACAATCTATTGATAATCTGGGATGAGATCTTTGCATCGGATAATAGTAAAGTTGAAAAAAGTGTTGATGACAACATAGACTGGGGTTTGAGGATTTTGCATTCTCCTCGTGGAGCATTTATTGCAGCTATGGCTGTTGCAATGCTACTTCATTTAAGATCTTCACTGCTTGCTACTGAAAATCCTACCACCTGTCTTCAGAGATTATTAAACTTTCCTGAAAACATTAATATTAAAAAGCTGCTGGAGAAGGCCAAATCATTGCAAGCTCGTGCACTAAGTGTTGATATTTCTTCTCCATCACCTTTGATTATAGGATATCATCTCCAAAGTAAATCAGTTATGACGCAATCTCAGACCCTTCCTTCTGAAACTGTGTCTCCAAAAACTCCTGTAAATTTGTTAACTGACAGCTACTGGGAAGAAAAATGGAGGGTTGCACATGAGGCTGAAGAACTTAAGCAAGATGGTATCGAACAACAGATTCCGACTCGGAAAAAGGGCTGGACAGAAAAGGTAAAAAACACACTGAGAAGAGCGGGATCTGATCCACCACCTTCAAGGATTAAGAATGGCAAAAAGGAATCTAAGGTGGTTAGGCGAAACATATTGGAAGCGCTTCATAAGGCACTTGGACCTGAGGAAGAAGCAGAACAAATGGATTGCCATGAAATCCTATGCAAGCAGGAAAATCTTTCTGAAGCAGCTGAAGGTGTGCAGCAAAATGATAACTCTAAAGGCGACAACAGTTACTCATCTGATGATAGATGTCCAAGTGGAAATACAGGGATAGAGGAAAGCTCCTCTGTATATTCTGACTCAACTAGCCCGCCTAATGAGGCCAATGATCATGAAATTACCTCGCAGGGAAGTAGTGTTGCCTCTAATTTATATCTTGACGAATGCGATGAAACTGCAGATACCAGTCTCAGTGATCCACCTCTTCCAGTCTCTGATCATCCTGAGAGCATACCTGAAACATCAGAGTCCACTGATGTTGATGTTGATAAATCTGAGAACATACCTCAGATGTCAGGGTGCAATAATAATGATCCAGGAAATTCTGCTACACATCCCAAGGAGAAAAAGCAGAATAAATTTCAGTGGTTTTGGAAGTTTGGACGGAATACTGTTGAGGGTATATCGGGGAAAGTAGGAGCTGCTTCTGAACCTACAAAATCCACCAGCAGCTGTAGTAACCAAAGTAATTCGCAACCACCTGTCTCTTCTACCACCAGTGAGCATTTCACTTCTGTTAGTAGCAAAGGAGATTCTGTAGACCAGAATGTGATGGGCACTTTGAAGAATATTGGACAGTCTATGCTTGACCATATCCAGGTAATTGAATCTGTTTTCCAACAAGACAGGAACCAGGGAGTCTCAGTGGAGAACTTATCTAAAAATATTCTTGTTGGCAAAGGGCAGGTTACTGCCATGGCAGCTCTCAAGGAGCTTCGGAAGATTAGCAATATTCTGTCTGAGATGTGA 2580 0.4326 MPPALMNPLMPPPPPPSVSVSAPPELEGFDDVSGRSVTQNRRFGDLRGLQWRVDLGVLPSESSTSIDDLRRVTANCRRRYANLRRRLLVEPHIPKDGSNSPDLTMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGNYFQTPGCQGILRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDVERLSEVRKLYEDIFTDKFDGLLYQENDLSYSFDFRKSQDLLEDEIGSHGNAKVKSLDELDPALQTIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMSGVRGSVAMADFFSSFPVAGSQTGLPPVIEASTALYHLLCLVDSSLYSHLLDLGVEPQYFSLRWLRVLFGREFSLDNLLIIWDEIFASDNSKVEKSVDDNIDWGLRILHSPRGAFIAAMAVAMLLHLRSSLLATENPTTCLQRLLNFPENINIKKLLEKAKSLQARALSVDISSPSPLIIGYHLQSKSVMTQSQTLPSETVSPKTPVNLLTDSYWEEKWRVAHEAEELKQDGIEQQIPTRKKGWTEKVKNTLRRAGSDPPPSRIKNGKKESKVVRRNILEALHKALGPEEEAEQMDCHEILCKQENLSEAAEGVQQNDNSKGDNSYSSDDRCPSGNTGIEESSSVYSDSTSPPNEANDHEITSQGSSVASNLYLDECDETADTSLSDPPLPVSDHPESIPETSESTDVDVDKSENIPQMSGCNNNDPGNSATHPKEKKQNKFQWFWKFGRNTVEGISGKVGAASEPTKSTSSCSNQSNSQPPVSSTTSEHFTSVSSKGDSVDQNVMGTLKNIGQSMLDHIQVIESVFQQDRNQGVSVENLSKNILVGKGQVTAMAALKELRKISNILSEM 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01733 859 SMART tbc_4 33 408 IPR000195 -
Arst4g01733 859 Pfam Rab-GTPase-TBC domain 127 186 IPR000195 -
Arst4g01733 859 Pfam Rab-GTPase-TBC domain 277 378 IPR000195 -
Arst4g01733 859 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 314 453 IPR035969 -
Arst4g01733 859 FunFam TBC1 domain family member 5 317 461 - -
Arst4g01733 859 MobiDBLite consensus disorder prediction 1 32 - -
Arst4g01733 859 MobiDBLite consensus disorder prediction 701 719 - -
Arst4g01733 859 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 45 338 IPR035969 -
Arst4g01733 859 Gene3D - 317 459 - -
Arst4g01733 859 MobiDBLite consensus disorder prediction 1 21 - -
Arst4g01733 859 ProSiteProfiles TBC/rab GAP domain profile. 41 378 IPR000195 -
Arst4g01733 859 MobiDBLite consensus disorder prediction 599 655 - -
Arst4g01733 859 MobiDBLite consensus disorder prediction 669 726 - -
Arst4g01733 859 MobiDBLite consensus disorder prediction 531 560 - -
Arst4g01733 859 MobiDBLite consensus disorder prediction 749 791 - -
Arst4g01733 859 MobiDBLite consensus disorder prediction 752 791 - -
Arst4g01733 859 Coils Coil 66 86 - -
Arst4g01733 859 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 110 295 - -
Arst4g01733 859 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 39 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01733 Arst-Chr4 29117711 29122187 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01733 K18469 - gmx:100812967 1132.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01733 4 29117711 29122187 Arst4g01733 4 29117711 29122187 ECH
Arst1g02806 1 89882226 89887168 Arst4g01733 4 29117711 29122187 PCT