Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02806 ATGCCACCAGCTATGGTGCTTTCGCCATTGCCGGAATCCCCGTCGGTGCTGTCAGTTCCGGAATCCCCATCGGAGACTCGTCGATTCGGAGATATCAGAGGTTTGCAGTGGCGTATCAGTCTCGGGGTTTTGCCTTCTTCGAATTCCATTGATGATCTTCGTCGTGCCACCGCTAATTCTAGAAGGAGATATGCCAATTTGAGAGGTCGCCTCCTGGTTGATCCCCATCTTCCAAAAGATGGAGGTAGTCCACCCAATCTTATCATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCTGAGCTGGAGAGGATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGGGGCTACTTCCAGACACCAGGATTCCAAGGCTTATTGAGACGGATTTTATTGCTATGGTGTCTCAAACACCCAGAGTGTGGTTATAGACAAGGAATGCATGAGTTACTTGCCCCGCTGCTATATGTTCTCCAAGTTGATGTGGAACATCTTTCCGCAATACGAAAGCTTTATGAAGATCACTTCACAGACAGATTTGATGGCCTTTTCTGTCAGGAGAATGATCATCGTTACAGCTTTGATATGAGAAAATCTACAGACTCAGAGGATGATATTGGTTCCTGTGGAGATGCATTGAAAATCCAGAGTCTCGATGAGCTTGACCCTAATATACGAGCGCTTGTATTGCTAGGTGATGCTTATGGGGCTGAAGGTGAACTTGGTGTTGTTTTGTCCGATAAATTCATGGAACACGATGCTTACTGCATGTTTGAGGCATTAATGAGTGGTGCTCATGGTTCAGTTGCAATGGCTGATTTCTTCTCTTATTCACCTGTGGCTGGGTCCAATACTGGCTTGCCTCCTGTAATTGAAGCTTCAAATGCATTGTATCATTTGTTGTATCACGTTGATTCATCTCTACACAGTCATCTTGTTGATCTTGGGGTTGAACCCCAGTACTTTGCTCTTCGCTGGTTCCGAGTTTTATTTGGACGGGAATTTTCACTCGACAACCTCTTGATCATCTGGGATGAGATATTTTTATCAGATAATAGTAAAAAGCAGAAGCTTGCTGAGGACACTACAGAATCTGGTTTTATGATATTACAATCACCTCGTGGAGCCTTTATCACGGCTATGGCTGTAGCAATGTTACTTCGATTAAGATCTTCACTACTGGCAACTGAAAATCCCACAATCTGTCTTCAGAGGTTATTAAACTTCCCCGGGGACACAGATATTGATAAACTACTAGCAAAGGCTAAATCCTTGCAGGATATTGCATTAAGTACTGAAATTTCATCATCAATACCTTCATTTGTGTGGTTTCATAACCAAGCAAAATCAATTAGTCAAAGATCTACGACTCATGCATCTGACTCAGATTCTCCGAGAACTCCTCTGAAACTGTTGACTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGCCCACAGTACCGAAGAACTTAAGCAAGATGGAGCCGAAAATCAGGTTCCAGCTCAGAAAAAGAAATGGACAGAAAAGGTAAATGTCAGTTTAAAGAGAACAGAATCTGCCCCTTCTCCATCCACGACTAATGATGGTAAAAAGGAAAATAAGGAAGCTGTTAGACGCAGTTTGTTAGAAGATCTTTGTAAGGAACTTGGCTCAGAGGTAGATACAGAAAACCTGTATGTATTCGAGCAGGATAATCGTCCTGTAGTAGTTGAAAGGGAACAACAAGATGACGGCTCTGAATGCTGCAACAATTACTTTGCAGATGTTAGAGGTCTAAGTGTAAGTACTAGAAGTGAGGGAAATTCACCTATATTTTCTGGCCTAGCTAGTCCTCGTTTGGATGTCAATCGTCGAAACTATTCTGAGAAAAGTAGCATTCCGTATAATTATAATTTGTCCTTTCTTGAAACTGAAATCAATGAAACTGGTTCACCTCTTCCAGTCTCTGATTGTCCTGAGAACTTATCTCACACATCCTCCTTCAACAATGATCCTTTGGGAAATTCAGCCTCACATCCTAAGTGGGGAAAGCTGAATAAATTCCAGTGGTTTTTTTCAAGGCTTGGACGAAACAGTGATGAACGTACATCTGTCGAGGGTGGAAGTCCTTCTCAAGATGCAAAACCTGCCAAATGCGAAAATCAAAGTCATGTAATGATACCCTCTTCTTCTATAGCAAATGGGCATTGTAGTCCTGTTAGAAGCCAAGGGGATTCTCCGATAGACCAGAATATGGTAGGAACTATTAGGAATATTGGGCAGTCTATGCTTGAGCATATTCAGGTGATTGAGTCTTCTTTCCAACAAGAACAGGGAGCTTCGAAAGATGTTGTGGTTGGTAAAGGGCAGCTTGCTGCCATGACAGCAGCTCTGGATGAACTTCGAAAAATTAGTAATCTTTTGTCTGAGATGTGA 2448 0.4248 MPPAMVLSPLPESPSVLSVPESPSETRRFGDIRGLQWRISLGVLPSSNSIDDLRRATANSRRRYANLRGRLLVDPHLPKDGGSPPNLIMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGGYFQTPGFQGLLRRILLLWCLKHPECGYRQGMHELLAPLLYVLQVDVEHLSAIRKLYEDHFTDRFDGLFCQENDHRYSFDMRKSTDSEDDIGSCGDALKIQSLDELDPNIRALVLLGDAYGAEGELGVVLSDKFMEHDAYCMFEALMSGAHGSVAMADFFSYSPVAGSNTGLPPVIEASNALYHLLYHVDSSLHSHLVDLGVEPQYFALRWFRVLFGREFSLDNLLIIWDEIFLSDNSKKQKLAEDTTESGFMILQSPRGAFITAMAVAMLLRLRSSLLATENPTICLQRLLNFPGDTDIDKLLAKAKSLQDIALSTEISSSIPSFVWFHNQAKSISQRSTTHASDSDSPRTPLKLLTDSYWEEKWRVAHSTEELKQDGAENQVPAQKKKWTEKVNVSLKRTESAPSPSTTNDGKKENKEAVRRSLLEDLCKELGSEVDTENLYVFEQDNRPVVVEREQQDDGSECCNNYFADVRGLSVSTRSEGNSPIFSGLASPRLDVNRRNYSEKSSIPYNYNLSFLETEINETGSPLPVSDCPENLSHTSSFNNDPLGNSASHPKWGKLNKFQWFFSRLGRNSDERTSVEGGSPSQDAKPAKCENQSHVMIPSSSIANGHCSPVRSQGDSPIDQNMVGTIRNIGQSMLEHIQVIESSFQQEQGASKDVVVGKGQLAAMTAALDELRKISNLLSEM 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02806 815 MobiDBLite consensus disorder prediction 524 538 - -
Arst1g02806 815 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 297 437 IPR035969 -
Arst1g02806 815 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 31 322 IPR035969 -
Arst1g02806 815 MobiDBLite consensus disorder prediction 703 723 - -
Arst1g02806 815 Pfam Rab-GTPase-TBC domain 259 363 IPR000195 -
Arst1g02806 815 Pfam Rab-GTPase-TBC domain 111 191 IPR000195 -
Arst1g02806 815 Gene3D - 301 445 - -
Arst1g02806 815 SMART tbc_4 24 408 IPR000195 -
Arst1g02806 815 ProSiteProfiles TBC/rab GAP domain profile. 27 362 IPR000195 -
Arst1g02806 815 MobiDBLite consensus disorder prediction 499 545 - -
Arst1g02806 815 MobiDBLite consensus disorder prediction 1 25 - -
Arst1g02806 815 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 95 279 - -
Arst1g02806 815 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 27 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02806 Arst-Chr1 89882226 89887168 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02806 K18469 - gmx:100816501 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02806 1 89882226 89887168 Arst1g02806 1 89882226 89887168 ECH
Arst1g02806 1 89882226 89887168 Arst4g01733 4 29117711 29122187 PCT