Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01340 ATGGGTATCTTTACACACGAATTTGCTACTCCATCTTCTGTGGCTCCTGCTAGGCTTTACAAAGCTATGGCATTAGATTTTCATAATCTCTTCCCAAAGATTGTAGATTCTATTCAGTGTGTTGAAACAATTGAAGGAAATGGTGCTGCTGGAACAATAAAGAAGATCACCTTGGTTGAAGGTCAAGTTGAAGAAGTTGATGAGGCCAAAAGGGTATACAACTACAGCATAATTGGGGGTGTAGGGTTACCAGAAACATGGGAGAAGATCTCATTTGAGACCATAGTAATGGAAGGTCCAAAAGAGGAAGGAGGATCCATTAGGAAGGTGAACATAAAGTATTTCACTAAAGGAGATGCTGAGGTGTGTGATGAAGTGCTCAAGAGTAACCAAAGCAGGGCTGAAGGCCTTCTCAAGTTCATTGAGGCTTATCTTCTTGCAAATCCTCATTATGTATAA 459 0.4052 MGIFTHEFATPSSVAPARLYKAMALDFHNLFPKIVDSIQCVETIEGNGAAGTIKKITLVEGQVEEVDEAKRVYNYSIIGGVGLPETWEKISFETIVMEGPKEEGGSIRKVNIKYFTKGDAEVCDEVLKSNQSRAEGLLKFIEAYLLANPHYV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01340 152 FunFam Major pollen allergen Bet v 1-A 1 152 - -
Arst4g01340 152 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01340 152 PRINTS Major pollen allergen Bet V1 signature 103 119 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01340 152 PRINTS Major pollen allergen Bet V1 signature 137 147 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01340 152 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01340 152 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst4g01340 152 CDD Bet_v1-like 4 145 - -
Arst4g01340 152 SUPERFAMILY Bet v1-like 2 151 - -
Arst4g01340 152 Pfam Pathogenesis-related protein Bet v 1 family 4 148 IPR000916 GO:0006952
Arst4g01340 152 Gene3D - 2 152 IPR023393 -
Arst4g01340 152 PANTHER - 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01340 Arst-Chr4 14754076 14755177 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01340 - - aip:107639015 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01340 4 14754076 14755177 Arst4g01340 4 14754076 14755177 ECH
Arst1g03376 1 94843101 94844348 Arst4g01340 4 14754076 14755177 PCT