Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03376 ATGGGCGTCTTCACTTTTGAGGATGAAATCACCTCCACCGTGCCCCCTGCTAAGCTTTACAATGCTTTGAAGGATGCCGACTCCCTCACCCCTAAAATTATTGATGACGTCAAGAGTGTTGAAATTGTTGAGGGAAACGGTGGTCCCGGAACCATCAAGAAACTCAACATTGTCGAGGGTGCGGAAACCAAGTTTATCTTGCACAAGGTGGAGGCAATAGATGAGGCTAACTTTGCATACAACTACAGCGTGGTTGGAGGAGTGGCTCTGCCTCCCACGGCGGAGAAGATAACATTTGAGACAAAGCTGGTACAAGGACCCAACGGAGGATCCATTGGGAAGCTTACTCTCAAGTACCACTCTAAAGGAGATGCAAAGCCAGATGAGGAAGAGTTGAAGAAGGGTAAGGCCAAGGGTGAAGGTCTCTTCAGGGCTATTGAGGGTTACGTCTTGGCCAACCCTTCTCAGTATTAG 474 0.4873 MGVFTFEDEITSTVPPAKLYNALKDADSLTPKIIDDVKSVEIVEGNGGPGTIKKLNIVEGAETKFILHKVEAIDEANFAYNYSVVGGVALPPTAEKITFETKLVQGPNGGSIGKLTLKYHSKGDAKPDEEELKKGKAKGEGLFRAIEGYVLANPSQY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03376 157 CDD Bet_v1-like 4 150 - -
Arst1g03376 157 FunFam Major pollen allergen Bet v 1-A 1 157 - -
Arst1g03376 157 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 87 119 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst1g03376 157 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst1g03376 157 PRINTS Major pollen allergen Bet V1 signature 108 124 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst1g03376 157 PRINTS Major pollen allergen Bet V1 signature 48 57 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst1g03376 157 PRINTS Major pollen allergen Bet V1 signature 83 96 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst1g03376 157 PRINTS Major pollen allergen Bet V1 signature 142 152 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst1g03376 157 PRINTS Major pollen allergen Bet V1 signature 64 83 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Arst1g03376 157 Gene3D - 2 156 IPR023393 -
Arst1g03376 157 PANTHER - 1 157 - -
Arst1g03376 157 Pfam Pathogenesis-related protein Bet v 1 family 1 153 IPR000916 GO:0006952
Arst1g03376 157 SUPERFAMILY Bet v1-like 2 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03376 Arst-Chr1 94843101 94844348 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03376 - - gmx:100500525 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03376 1 94843101 94844348 Arst1g03376 1 94843101 94844348 ECH
Arst1g03376 1 94843101 94844348 Arst4g01340 4 14754076 14755177 PCT
Arst4g01344 4 14800534 14801715 Arst1g03376 1 94843101 94844348 PCT