Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00650 ATGGGAAACAACTCTAATATGGTTATGCTGGGTTCGGTTCTGTCAACCCTGTTGTTTTCTCTGGTTTCCTCTGCCGCCGGTGGTGAGGGGCTGCATAGGATTGGGCTCAAAAAGTTCAATAAGCTGGATGGCCATGACCGCTTGGCTGCACGCCTTGGCTTCACAGATGTTGAGTCCATGAGGTCCACCATTAAGAAGATGATACTCCAATACTACCTTGGAGCTCCCGGGGACGCCGATATTGTTGCGTTGAAGAATTACTTGGATGCTCAATACTATGGTGAAATAAGCATTGGTACCCCTCCCCAGAAGTTCACTGTTATTTTTGATACTGGTAGCTCTAATATGTGGGTTCCATCATCTAAATGTTACTTCTCGGTTGCTTGCTACCTACATAACAAGTATAAGTCTAGCGAATCAAGTACATATAAGGAAAATGGGACTTCTGCTGCTATTCAATATGGTACTGGATCAATTTCTGGATTCTTTAGCTATGATGATGTCAAAGTTGGTGTCATAACTGTAAAGAACCAGGAATTCATTGAAGCAACTAAAGAGCCTGGAGTTACATTTGTAGCAGCTAAGTTTGATGGTTTGGTTGGACTTGGATTCCAAGAGATAGCAGTTGGAAAAGCTGTTCCACTGTGGTACAATATGATTGAGCAGGGTCTTGTTAAGGATCCAGTATTTTCATTTTGGCTCAATCGTAATCCAAATGACGCTCAGGGTGGCGAGATTGTGTTTGGTGGTGTTGATCCTTCTCACTTTAAAGGTGAACATACATATGTGCCAGTGACAAAAAAGGGATATTGGCAGTTTGACATGGGAGATGTTCTTATTGGTAGCAAACCCACTGGATATTGTGCAAAGGGCTGCTCAGCAATTGCAGACTCGGGGACTTCTTTGTTGGCTGGTCCAACGGCTATAATCACACAAATAAATCAAGCAATTGGAGGATCTGGAGTTGTAAGCCAACAATGCAAATCTGTCGTTGAACACTACGGACAAACAATATTGAACTTACTCTTGGTTGAAGCAAATCCAAGGAAGATATGCTCTCAAATTGGACTATGCACCTTTGATGGAAGTCATGGTGTTAGTATGGGGATCGAGAGCGTGGTCGACAGGAAAGAAAGAGAATTGTCTGGTGGATACGGGGATGCTACTTGTTCTGCATGTGAGATGGCTGTTGTTTGGATGCAGAACCAACTGAGTCAGAATCAGACACAAGATAAGATCATAGACTATGTCAATCAGCTTTGTGAGAAATTGCCTAGCCCAATGGGCCAATCATCTGTTGACTGTGAAAAGATCTCTTCAATGCCTGTTGTCTCCTTCACTATTGGTGGAAAAACTTTTGACCTTTCCCCACAGGATTACATACTCAAGGTGGGTGAAGGTCCTCAAGCCCAATGCATCAGTGGCTTTACTGCTTTGGATGTTCCTCCTCCACGTGGTCCTCTCTGGATCCTTGGAGATGTCTTCATGGGACGCTATCACACAGTCTTTGATTATGGAAAAAGTAGAGTTGGGTTTGCCCATGCTGCGTAG 1551 0.4371 MGNNSNMVMLGSVLSTLLFSLVSSAAGGEGLHRIGLKKFNKLDGHDRLAARLGFTDVESMRSTIKKMILQYYLGAPGDADIVALKNYLDAQYYGEISIGTPPQKFTVIFDTGSSNMWVPSSKCYFSVACYLHNKYKSSESSTYKENGTSAAIQYGTGSISGFFSYDDVKVGVITVKNQEFIEATKEPGVTFVAAKFDGLVGLGFQEIAVGKAVPLWYNMIEQGLVKDPVFSFWLNRNPNDAQGGEIVFGGVDPSHFKGEHTYVPVTKKGYWQFDMGDVLIGSKPTGYCAKGCSAIADSGTSLLAGPTAIITQINQAIGGSGVVSQQCKSVVEHYGQTILNLLLVEANPRKICSQIGLCTFDGSHGVSMGIESVVDRKERELSGGYGDATCSACEMAVVWMQNQLSQNQTQDKIIDYVNQLCEKLPSPMGQSSVDCEKISSMPVVSFTIGGKTFDLSPQDYILKVGEGPQAQCISGFTALDVPPPRGPLWILGDVFMGRYHTVFDYGKSRVGFAHAA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00650 516 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 107 118 IPR001969 GO:0004190|GO:0006508
Arst4g00650 516 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 26 513 IPR001461 GO:0004190|GO:0006508
Arst4g00650 516 FunFam Lysosomal aspartic protease 77 320 - -
Arst4g00650 516 CDD phytepsin 82 513 IPR033869 GO:0004190
Arst4g00650 516 Pfam Eukaryotic aspartyl protease 91 514 IPR033121 -
Arst4g00650 516 Gene3D - 322 425 - -
Arst4g00650 516 Pfam Saposin-like type B, region 2 325 358 IPR008138 -
Arst4g00650 516 Gene3D Acid Proteases 32 250 IPR021109 -
Arst4g00650 516 ProSiteProfiles Saposin B type domain profile. 322 362 IPR008139 -
Arst4g00650 516 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 294 305 IPR001969 GO:0004190|GO:0006508
Arst4g00650 516 Pfam Saposin-like type B, region 1 389 425 IPR007856 GO:0006629
Arst4g00650 516 SUPERFAMILY Acid proteases 78 515 IPR021109 -
Arst4g00650 516 PRINTS Pepsin (A1) aspartic protease family signature 244 257 IPR001461 GO:0004190|GO:0006508
Arst4g00650 516 PRINTS Pepsin (A1) aspartic protease family signature 294 305 IPR001461 GO:0004190|GO:0006508
Arst4g00650 516 PRINTS Pepsin (A1) aspartic protease family signature 98 118 IPR001461 GO:0004190|GO:0006508
Arst4g00650 516 PRINTS Pepsin (A1) aspartic protease family signature 489 504 IPR001461 GO:0004190|GO:0006508
Arst4g00650 516 ProSiteProfiles Saposin B type domain profile. 386 427 IPR008139 -
Arst4g00650 516 FunFam Vacuolar aspartic proteinase 385 515 - -
Arst4g00650 516 SMART sapb_4 388 472 IPR008139 -
Arst4g00650 516 SMART sapb_4 286 358 IPR008139 -
Arst4g00650 516 ProSiteProfiles Peptidase family A1 domain profile. 92 513 IPR033121 -
Arst4g00650 516 Gene3D Acid Proteases 251 516 IPR021109 -
Arst4g00650 516 SUPERFAMILY Saposin 323 425 IPR011001 -
Arst4g00650 516 FunFam Aspartic proteinase A1 322 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00650 Arst-Chr4 4790420 4793847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00650 K08245 - gmx:547943 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00650 4 4790420 4793847 Arst4g00650 4 4790420 4793847 ECH
Arst4g00650 4 4790420 4793847 Arst1g03629 1 97572053 97576159 ECH
Arst1g03630 1 97572053 97575984 Arst4g00650 4 4790420 4793847 PCT