Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03629 ATGGGCAACAAGGCGAATGCGGTTGTGTTATGGTTGTTTGTGTCATCCCTGTTGCTATCTGTGGTGTTGAGTGCGCCAAATGATGGTTTACGAAGGATTGGACTGAAAAAGGTTAAACCTGACCTCAATAATCGGCTTGCCGCTCGATTGGGGTCCAATGACGAGGCTTTACGTGCTTCTATTAGAAAGCACCATCTCCAAAACAATCTCGGTGGTGATGATGAAACTGACATTGTTGGTTTAAAGAACTACTTGGATGCTCAGTACTATGGTGAAATAGGAATCGGAACTCCTCCTCAGAAATTCTCTGTCATCTTTGACACCGGCAGTGCTAATTTGTGGGTGCCTTCATCCAAGTGTACCTTCTCGATTGCGTGCTACTTCCATTCAAAGTACAAGTCTGCCAAATCGACTACCTATAAGAAGAATGGGACTGCCGTTGCAATTCAATATGGTACTGGAGCAATTTCTGGTTTCTTTAGCTATGACAATGTCAAAGTTGGCGACATAGTTGTGAAGAATCAGGAATTTATTGAAGCAAATAGAGAGCCTAGTGTGACATTTTTGGTGGCCAAGTTTGATGGAATATTGGGACTTGGGTTTCAAGAGATAGCAGTTGGGAATGCTGTTCCAGTTTGGTACAATATGCTTGATCAAGGTCTTGTTAAGGAACCGGTGTTTTCATTTTGGCTGAACCGTAACCCAGAGGAAGAGAATGGGGGCGAACTTGTTTTTGGAGGTGTTGATCCCAATCACTACAAGGGAAAGCACACTTATGTGCCTGTGTCGAGAAAAGGATATTGGGAGTTTGATATGGGAGATATACTTATTGGAGACAAAAAAACTGGAATTTGTGCTGACAGCTGTTCAGCTATTGCAGACTCGGGGACTTCTTTGTTGGCAGGTCCAACGACTGTGATTACTATGATAAATCATGCAATTGGAGCAGCAGGAGTTGTAAGCCAAGAATGCAAAGCCGTTGTTGCGCAGTATGGACAAATAATCATAGACCTGCTTGCGGCCGATGCACCTCCAAAGAAGATCTGTACCCAAATTGGATTGTGCACTTTTGATGGGACACGGGGTGTTAGTGGGGGTATCGAGAGTGTGGTGGATGAGCATCAAAGATCATCATCTGGTGGCGGTATTGCTTGTTCTGCATGCGAGATGGCAGTTGTTTGGATGCGGAGCCAGCTCAATCAGAATCAGACAAAAGATCGGATACTAAACTATGTTAACCAGCTTTGTGATAAAATGCCTAGCCCGATGGGAGAATCATCTGTTGACTGTGGGGACTTGTCTAAAATGCCTACCATTTCCTTCAGTATTGGTGGAAGAACTTTTGACCTTTCCCCAGATGAGTATATACTAAAGGTTGGCGAAGGTGTTGCGGCTCAGTGCATTAGTGGCTTCACTGCAATTGATATTCCTCCTCCACGTGGCCCTCTCTGGATCCTTGGAGATGTGTTCATGGGGCGCTATCACACTGTCTTCGATTTTGGCCAAGGGAGAGTTGGATTCGCCGAAGCAGCATAA 1536 0.4486 MGNKANAVVLWLFVSSLLLSVVLSAPNDGLRRIGLKKVKPDLNNRLAARLGSNDEALRASIRKHHLQNNLGGDDETDIVGLKNYLDAQYYGEIGIGTPPQKFSVIFDTGSANLWVPSSKCTFSIACYFHSKYKSAKSTTYKKNGTAVAIQYGTGAISGFFSYDNVKVGDIVVKNQEFIEANREPSVTFLVAKFDGILGLGFQEIAVGNAVPVWYNMLDQGLVKEPVFSFWLNRNPEEENGGELVFGGVDPNHYKGKHTYVPVSRKGYWEFDMGDILIGDKKTGICADSCSAIADSGTSLLAGPTTVITMINHAIGAAGVVSQECKAVVAQYGQIIIDLLAADAPPKKICTQIGLCTFDGTRGVSGGIESVVDEHQRSSSGGGIACSACEMAVVWMRSQLNQNQTKDRILNYVNQLCDKMPSPMGESSVDCGDLSKMPTISFSIGGRTFDLSPDEYILKVGEGVAAQCISGFTAIDIPPPRGPLWILGDVFMGRYHTVFDFGQGRVGFAEAA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03629 511 Pfam Saposin-like type B, region 1 384 420 IPR007856 GO:0006629
Arst1g03629 511 SUPERFAMILY Acid proteases 54 510 IPR021109 -
Arst1g03629 511 FunFam Lysosomal aspartic protease 75 317 - -
Arst1g03629 511 Pfam Saposin-like type B, region 2 322 355 IPR008138 -
Arst1g03629 511 ProSiteProfiles Saposin B type domain profile. 381 422 IPR008139 -
Arst1g03629 511 Gene3D Acid Proteases 31 247 IPR021109 -
Arst1g03629 511 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 104 115 IPR001969 GO:0004190|GO:0006508
Arst1g03629 511 SUPERFAMILY Saposin 320 420 IPR011001 -
Arst1g03629 511 Pfam Eukaryotic aspartyl protease 88 510 IPR033121 -
Arst1g03629 511 Gene3D Acid Proteases 248 511 IPR021109 -
Arst1g03629 511 ProSiteProfiles Saposin B type domain profile. 319 359 IPR008139 -
Arst1g03629 511 Gene3D - 319 420 - -
Arst1g03629 511 CDD phytepsin 79 509 IPR033869 GO:0004190
Arst1g03629 511 FunFam Vacuolar aspartic proteinase 380 510 - -
Arst1g03629 511 PRINTS Pepsin (A1) aspartic protease family signature 95 115 IPR001461 GO:0004190|GO:0006508
Arst1g03629 511 PRINTS Pepsin (A1) aspartic protease family signature 291 302 IPR001461 GO:0004190|GO:0006508
Arst1g03629 511 PRINTS Pepsin (A1) aspartic protease family signature 241 254 IPR001461 GO:0004190|GO:0006508
Arst1g03629 511 PRINTS Pepsin (A1) aspartic protease family signature 484 499 IPR001461 GO:0004190|GO:0006508
Arst1g03629 511 ProSiteProfiles Peptidase family A1 domain profile. 89 508 IPR033121 -
Arst1g03629 511 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 18 509 IPR001461 GO:0004190|GO:0006508
Arst1g03629 511 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 291 302 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03629 Arst-Chr1 97572053 97576159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03629 K08245 - gmx:100779619 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03629 1 97572053 97576159 Arst1g03629 1 97572053 97576159 ECH
Arst4g00650 4 4790420 4793847 Arst1g03629 1 97572053 97576159 ECH