Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05996 ATGAGAACAAGAAGAGGATTGTGTTATTCTGCACCTGGAGTAGTAACAAGGATGTGTTCCGTAGGGGTTGGGAAGAGAAAGAACAACAAGTTGCAGCATAATGTTTACGGAGACTCTAATATTTATAGCCTCAGGAAAAGGCACAAGAGGTTACCGGAAAAGGCCGCCGGCGAATGCGATTTTTTCGAGTCTTTGCCGGACGACCTTGTAATCTCTATCTTCTGCAAGCTTAGCTCCTCCGCTACTTCCCCTTCCGATTTTGTCAATGTTTTAATCACATGCAGGAGATTAAACAGTTTAGGTCTCCATTCTCTTGTGTTATCGAAAGCATCTCCGAGGACTTTCTCTATTAGAGCAAAGAACTGGTGCGATTCGGCGCACCGGTTCCTCAAACAGTGTGCAGATGCAGGAAATGTTGAAGCATGCTATACTCTAGGCATGATTCGGTTCTACTGTTTGCAGAACAGAGGGAGCGGGGCTTCACTCATGGCCAAGGCAGCCATGAACTCTCACGCACGAGCTCTCTATTCGCTCGCCGTTATACAGTTCAACGGTAGCGGAGGCACCAAGAACGACAAGGACCTCCGTGCCGGAGTTGCCTTGTGCGCACGCGCCGCCTTCCTCGGCCACGTCGACGCGCTGCGGGAGCTAGGCCACTGCCTTCAGGATGGATACGGCGTTCGCCAGAACATCGCGGAGGGGAGGCGCTTCCTTGTTCAGGCCAACGCCAGGGAACTCGCCGCCGTGATCTCCGCCGGAGCTGCTGCGCGCCAGTGGCTGACATGGAACATCCACCCGCTCCGCCAGTTCGCCGGGTCAGCGGCAGGTTGCCCGCTGCTGAGCGATTTCGGGTGCAATGTTCCGATGCCGGAGGCACATCCGGCGAGCAGGTTCCTGTCGGAATGGTTCGCGGCTCGGGACGCGTCTCCCGGTCCGGGACTGAGGTTGTGCTCTCATGCCGGTTGCGGTCGGCCAGAGACGAGGAAGCACGAGTTTCGAAGGTGCTCGGTGTGTGGCGCGGTGAACTATTGTTCACGCGCCTGCCAGGCGCTTGATTGGAAGTTTCGGCACAAGGTGGAGTGCACCCCCGTGGAGCGGTGGCTCGAGGACGACGGAGATGACGTCGTTGATGACGGCGTAGACGCTGACGCCGTGATGGCGGTGGATAGTTAG 1173 0.5635 MRTRRGLCYSAPGVVTRMCSVGVGKRKNNKLQHNVYGDSNIYSLRKRHKRLPEKAAGECDFFESLPDDLVISIFCKLSSSATSPSDFVNVLITCRRLNSLGLHSLVLSKASPRTFSIRAKNWCDSAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHARALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVISAGAAARQWLTWNIHPLRQFAGSAAGCPLLSDFGCNVPMPEAHPASRFLSEWFAARDASPGPGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECTPVERWLEDDGDDVVDDGVDADAVMAVDS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05996 390 Gene3D Tetratricopeptide repeat domain 111 262 IPR011990 GO:0005515
Arst3g05996 390 PANTHER MYND DOMAIN-CONTAINING 29 376 IPR044508 -
Arst3g05996 390 CDD F-box_SF 63 100 - -
Arst3g05996 390 Pfam MYND finger 321 361 IPR002893 -
Arst3g05996 390 ProSiteProfiles Zinc finger MYND-type profile. 319 361 IPR002893 -
Arst3g05996 390 FunFam Predicted protein 309 366 - -
Arst3g05996 390 SUPERFAMILY F-box domain 53 117 IPR036047 GO:0005515
Arst3g05996 390 Gene3D - 312 365 - -
Arst3g05996 390 SUPERFAMILY HIT/MYND zinc finger-like 316 366 - -
Arst3g05996 390 SUPERFAMILY HCP-like 122 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05996 Arst-Chr3 133494869 133496520 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05996 - - gmx:100798174 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05996 3 133494869 133496520 Arst3g05996 3 133494869 133496520 ECH
Arst10g00865 10 7675231 7677114 Arst3g05996 3 133494869 133496520 PCT