Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00865 ATGAGAACCAGAAGAGGAGGCCTCTCTTATCCTCCACTTCTACCCTTATCCACCATGTGTTCCAACAAAGCTCTTTCAGAAAGGTCCTCTTTCAACACACTCACACCACTCCCCAATAGAAACAGAAACAACAAAATGCCTTCTTCGCAACAACAATTCGTTAGCCGTAAAAGGCACAAGACATTATCATTATTATCATCTTCCTCTTCCGACACAACAACAACAACAGTCGGAGGCTCCGAACTCTTGGAGACCTTGCCGGATGACATTCTCCTCTCAATCCTCGCGAAACTTAGTTCGTCCTCCAATTCTCCTTCCGATTTCATCCGTGTTCTTTTGACGTGTAAAAGGCTGAACAGGTTGGGTCTTCACTCAGTGGTTCTATCAAAAGCATCCCAAAAAACATTCTCAGTCAAAGCCAGAAACTGGTCAGAATCTTCTCACCGCTTCCTCAAACGTTGCGCTGATGCCGGAAACATCGAAGCATGCTACACTCTTGGAATGATTCGGTTCTACTGTTTAGGAAACCGTGAGAGTGGAAGGTCGCTTATATCGAAGGCGGCGATGAGGTGTCACGCGCCGGCACTTTACTCTCTGGCCGTTATACAGTTCAATGGGAGCGGAGCCTCGAAGGACGACAAGGACCTAAGGGGCGGTGTGGCTCTTTGCGCACGCGCCGCATTCCTCGGCCACGTCGACGCGCTGCGCGAGTTGGGTCATTGCTTGCAAGACGGTTACGGAGTTAAGCGAAACGTTATGGAAGGGCGACGGTTTCTCGTTCAAGCCAACGCGCGTGAGCTGGTGTCCGTTTGCAACAGCCTCCACGCGCGCACTACTATCACGTGGGGCGTTATGCCGAACCAGAACCCGAACCTAAATCCAAGGGTCCAGTATGCTGCAGGGTGTCCGTTGCTAAGTGATTACGGCTGTAACGTCCCCGCTCAGGAGCCACACCTTGCGAACCGGTTCATGATTGAGTGGTTTTCGAACCGGGGTGGTTCGGCCGGGCCGAGTCGGAGGCTGTGTTCACATTTGGGTTGTGGAAGGCCTGAAACGAGGAAGAGAGAGTTTCGGAGATGTTCGGTTTGTGGAGTGGTTAATTATTGCTCACGCGCTTGCCAAGCACTTGACTGGAAGAGTCGGCATAAAGTGGAGTGTGCTCCTGTTGAGAGGTGGATCGACGATGACGACGGTGAAGATGGCGGTGAAGTGGCAGTGGTGGATAGTTAG 1230 0.5163 MRTRRGGLSYPPLLPLSTMCSNKALSERSSFNTLTPLPNRNRNNKMPSSQQQFVSRKRHKTLSLLSSSSSDTTTTTVGGSELLETLPDDILLSILAKLSSSSNSPSDFIRVLLTCKRLNRLGLHSVVLSKASQKTFSVKARNWSESSHRFLKRCADAGNIEACYTLGMIRFYCLGNRESGRSLISKAAMRCHAPALYSLAVIQFNGSGASKDDKDLRGGVALCARAAFLGHVDALRELGHCLQDGYGVKRNVMEGRRFLVQANARELVSVCNSLHARTTITWGVMPNQNPNLNPRVQYAAGCPLLSDYGCNVPAQEPHLANRFMIEWFSNRGGSAGPSRRLCSHLGCGRPETRKREFRRCSVCGVVNYCSRACQALDWKSRHKVECAPVERWIDDDDGEDGGEVAVVDS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00865 409 Gene3D Tetratricopeptide repeat domain 124 276 IPR011990 GO:0005515
Arst10g00865 409 FunFam Predicted protein 334 391 - -
Arst10g00865 409 SUPERFAMILY HIT/MYND zinc finger-like 341 391 - -
Arst10g00865 409 ProSiteProfiles Zinc finger MYND-type profile. 344 386 IPR002893 -
Arst10g00865 409 SUPERFAMILY F-box domain 78 139 IPR036047 GO:0005515
Arst10g00865 409 SUPERFAMILY HCP-like 147 263 - -
Arst10g00865 409 MobiDBLite consensus disorder prediction 31 54 - -
Arst10g00865 409 PANTHER MYND DOMAIN-CONTAINING 46 399 IPR044508 -
Arst10g00865 409 Gene3D - 331 390 - -
Arst10g00865 409 CDD F-box_SF 84 121 - -
Arst10g00865 409 Pfam MYND finger 347 386 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00865 Arst-Chr10 7675231 7677114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00865 - - qsa:O6P43_023849 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00865 10 7675231 7677114 Arst3g05996 3 133494869 133496520 PCT