Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05152 ATGAAAACCAACACTGATCAGCACTTGTTTCCTCCTTACATACATTTTCTCGAGAAAATCCCATCACCAGGTCAGCTCCAGCATGGAAATATTATATTATATTCTTTCCTAGTAACTATTATGGTGGATATCTCAAAGCTCACTGATATTTGTTTCATGAAGTATCCTAACGGGGCAACATATCTTACTCTGGTTCCTGTTTCTTTGAACAACAAAACCGATCCTATAAAGTGGGTTGATCCTATGGTTGCACCTGTTCAGAGTCCAAACAATGATTCTCAAGTTGTTCCTTCAGACATTGTAGTATCTAGCCTCTTTTCCATGAACAATTTCACCAAACAAGAGCAACAAACTATGCAGACATGGAACAAGTTAAAACACTTGCTTGATCATACTAAGGGATTGCCTAATGCTGTGGAAGCTGTTAAAGAAGCTAAAGGTGCATGGAATAGTCTTGTTTGCTTATTAGAAGAACAAAGGGAAGGTTATAGGAATGAGAGTTTGAGATTGAAGGAGAAACAATGTCCTTATTTTCTTAACAATATGAATTCCACAGAACTTGGTAGTGGTAGTTACAAGCTGAGGTTTCCTTGTGGCCTCACACAAGGTTCTTCCATATCTGTTATTGGCGTTCCCAAAGGGCTACTAGGCGATTTTCGGATCGACTTGACTGGAGAACCCCTTGCCGGAGAACCTGATCCTCCAATTGTTTTGCATTACAATGTTAGGCTCCATGGCGATAAGATCACCCAAGATCCTGTGATTGTTCAGAATACTTGGACAAAAGATCAAGATTGGGGTGCAGAGGAACGTTGCCCTTCTCCTACTCCTGAAAATGCTAAGAAAGTTGATGAGTTGGAGCAGTGCAATAAGATTGTGGGAAAGAACATGGAGGGCAATGGCATGCAGTCCCACACTTCCAGGAAACTTTCAGCACCAAAAGAGGAACAACTGAAAAACAGAAAATATTTTCCTTTTAAGCAAGGCGATCCATTTGTTGCAACTATTAGAGTTGGATCAGAGGGAATCCAAATGACTGTTGATGGAAAACACATAACTTCATTCGCTTTTCGCCAAACTTTGGAGCCATGGCTTGTGAGTGAGATGAGAATTTCAGGAGATGTTGAGTTAATTTCTGTCCTTGCCAGTGGTCTTCCTACATCAGAGGATTCAGAGCATATTGCTGATATAGAATCACTGAAATCTACTCCTATATCTTCCAATACCCCATTGGATCTCTTCATTGGTGTTTTCTCTACAGCTAACAATTTTGAGCGTAGGATGGCTGTTAGAAGAACATGGATGCAGTACAATGCAATTCGATCCAATCAAACCGCGGCCGTGCGCTTCTTCGTTGGTTTGCATAAGAACCAAATTGTAAATGAAGAACTGTGGAAAGAATCACAAACCTATGGTGACATTCAGCTAATGCCATTTGTTGACTACTATAGCATCATCTCATGGAAAACTTTAGCAATCTGCATTTTTGGGACAGAGATTGTTTCAGCAAGGTTTGTGATGAAGACAGACGATGATTCATTTGTTCGTGTGGATCAAGTTCTGGACAATTTGTATCGGATCAATGTGGATCATGGCTTGCTGTATGGACTCATCAATTCAGATTCTCGACCTCATCGAAGTGCTGATAGTAAATGGTACATCAGCCGGGAGGAATGGAGTGAAGAAACATATCCTCCATGGGCACACGGTCCGGGGTATGTGGTCTCACATGACATAGCAAGCATGGTGTACAAGAAATACACGCAAGGCCAATTAAAGATGTTCAAACTAGAAGACGTGGCAATGGGAATATGGATATCAGAGATGAAGAAGGGAGGGCTAGAAGTTCGGTACGAGAAAGAAAGCAGAGTCTATAATGTGGGTTGCAAGGATGGCTATGTGGTTGCACATTACCAAGATCCTAGGCAGATGCTTTGTTTGTGGCAGAAACTTGAGCTTCGTCAAGGTCCAAAATGCTGTGCTAATCGTAGAAGAAGATGA 2001 0.4138 MKTNTDQHLFPPYIHFLEKIPSPGQLQHGNIILYSFLVTIMVDISKLTDICFMKYPNGATYLTLVPVSLNNKTDPIKWVDPMVAPVQSPNNDSQVVPSDIVVSSLFSMNNFTKQEQQTMQTWNKLKHLLDHTKGLPNAVEAVKEAKGAWNSLVCLLEEQREGYRNESLRLKEKQCPYFLNNMNSTELGSGSYKLRFPCGLTQGSSISVIGVPKGLLGDFRIDLTGEPLAGEPDPPIVLHYNVRLHGDKITQDPVIVQNTWTKDQDWGAEERCPSPTPENAKKVDELEQCNKIVGKNMEGNGMQSHTSRKLSAPKEEQLKNRKYFPFKQGDPFVATIRVGSEGIQMTVDGKHITSFAFRQTLEPWLVSEMRISGDVELISVLASGLPTSEDSEHIADIESLKSTPISSNTPLDLFIGVFSTANNFERRMAVRRTWMQYNAIRSNQTAAVRFFVGLHKNQIVNEELWKESQTYGDIQLMPFVDYYSIISWKTLAICIFGTEIVSARFVMKTDDDSFVRVDQVLDNLYRINVDHGLLYGLINSDSRPHRSADSKWYISREEWSEETYPPWAHGPGYVVSHDIASMVYKKYTQGQLKMFKLEDVAMGIWISEMKKGGLEVRYEKESRVYNVGCKDGYVVAHYQDPRQMLCLWQKLELRQGPKCCANRRRR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05152 666 Pfam Galactoside-binding lectin 192 381 IPR001079 GO:0030246
Arst3g05152 666 Pfam Galactosyltransferase 425 610 IPR002659 GO:0006486|GO:0016020|GO:0016758
Arst3g05152 666 Gene3D - 188 381 - -
Arst3g05152 666 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 349 620 IPR002659 GO:0006486|GO:0016020|GO:0016758
Arst3g05152 666 Gene3D - 403 630 - -
Arst3g05152 666 FunFam Beta-1,3-galactosyltransferase GALT1 404 634 - -
Arst3g05152 666 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 192 383 IPR001079 GO:0030246
Arst3g05152 666 SMART Gal_bind_lectin_2 196 382 IPR001079 GO:0030246
Arst3g05152 666 CDD GLECT 192 380 IPR001079 GO:0030246
Arst3g05152 666 SMART galectin_3 190 383 IPR001079 GO:0030246
Arst3g05152 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 192 383 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05152 Arst-Chr3 126857672 126861734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05152 55 660 Glycosyltransferase AT1G26810 60.261 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05152 K14413 - gmx:100780913 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05152 3 126857672 126861734 Arst3g05152 3 126857672 126861734 ECH
Arst1g03253 1 93606567 93611500 Arst3g05152 3 126857672 126861734 PCT