Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03253 ATGTGTCTACAGAAACGGCTACGTTTAATTCAAGGTTTGCTGAAAATGAAGAAGTGGTATGGAGGCTTGTTGATCATGACTCTAGTTATGATGTTGGTTTTCCTGTACGGGTATAAAGGATTTCAGCCACAGAAACAGTCAGCAAAACAATCAGCATATAATTTCTTTCATAACCAACAATTAGTAGATGATTATGTTAACGGTGGTAGCAGTGCTCCTCCTATTAACTCATCTAAGGTGGAACAGAAAAGAGTACCGCTGGTACCAAGAGAAAGGCCACATTTGATTCATGTCGACGGGCTTGATGATCTGTATGGCATGAAAAATTTAACTGAAAGAGAGACGAATACTGTGATTGTATGGTCTTACTTGCATTCCTTGCTTTCGAGGTCAGATGCGCTGCCTGAAACTGCTCAAGGAGTTAAAGAAGCTTCTGTAACATGGAAAAAACTGCTGTCTATGGTTGAAGAAGACAAAGTTTCTAGGATTAATAATACAGAAAGCCCAGAAAATCAAAACTGCCCATTCTCTGTGACCACATTTGGTAAGACAATATCGGGCAGTGGAATCACTCTCGAGCTCCCTTGCGGTTTGGTTGAAGATTCTTCTATTACAATTATTGGCATCCCTAATGGGAATAGCAGCTTTCAAATTGTCCTTATTGGACAAGAGCTTGAAGAGAAGCCAAATCCTCCAATCATCTTATATTACAACATAAGAGTTCCTCAAGATAACATGACTGAGGAACCATATATAGTTCAAAATACATGGACTAGTAATTTTGGGTGGGGAAAAGAGGAAAGGTGTCCTGCTCGCGGTTCTGCTAACCAGAAAGTTGATGGATTTGCTCTCTGCAATGTACAAGTTGGAAGTAACAACGAAGACAATGTAAATGTGGGTCAACCTACTAGTGATATAACTGCTAATGTTTCCTCAGAAAGTGCACATAGAACTGGTAATTTCCCCTTTGCTGAAGGGAATCCTTTCACTGCCACATTGTGGGTTGGTTCAGAGGGATTTCATATGACTGTTAATGGAAGGCATGAAACTTCTTTTGCATACAGGGAGAAGCTTGAACCATGGCTAGTCAACAATGTTAAAGTAGCAGGCAGCCTAAATCTCTTATCTGTCCTGGCAAAAGGCTTACCCGTTATGGAAGATAGCGATTTAGTTGATGTTGATAAATTGAAGGCTCCTTCTATCACCAGGAAAAAGCTTGTTTTGTTGATTGGAGTGTTCTCTACTGGAAATAACTTTGAGCGCCGAATGGCGCTGAGGAGGTCTTGGATGCAATATGAGGCTGTACGTTCTGGAGAAGTTGCTGTCCGATTTTTCATTGGGCTTCACAAAAACAATAGAGTTAACTTTGAGTTGTGGAGTGAATCTCAAGCATATGGGGATATTCAATTAATGCCATTTGTTGATTATTATAGTTTGATTACTTTGAAGACAATTGCAATTTGCATTATGGGGACTAAAGTCATGCCATCTAAATACATCATGAAAACAGATGATGATGCTTTTGTTAGGATAGATGAAGTGCTTTCTAGCCTCAGAGGAAAGCCATCGAATGGTCTTTTGTTCGGCCTCATCTCTTCTAAATCGTCACCTGAGAGGGATAAAGAAAGCAAATGGTACATCAGTGAGAAGGAATGGCCATATGATACATACCCACCATGGGCTCATGGTCCTGGCTATGTAATCTCCCGAGACATAGCGAAATTCATTGTCAATGGCCACCAGGAAAGAAAACTCCAGCTCTTTAAATTAGAAGATGTTGCCATGGGAATATGGATTGAACAATTCAAGAATGGTGGCAAAGAAGTTCATTATGAAAATGATGAGAGGTTTTACAATGTTGGATGTGAATCAAATTATGTACTTGCGCATTATCAAAGCCCACGGTTGGTGCTGTGCCTTTGGGATAAACTGCAAAAAGAACATCAACCAAGATGCTGTGAGTAG 1965 0.4015 MCLQKRLRLIQGLLKMKKWYGGLLIMTLVMMLVFLYGYKGFQPQKQSAKQSAYNFFHNQQLVDDYVNGGSSAPPINSSKVEQKRVPLVPRERPHLIHVDGLDDLYGMKNLTERETNTVIVWSYLHSLLSRSDALPETAQGVKEASVTWKKLLSMVEEDKVSRINNTESPENQNCPFSVTTFGKTISGSGITLELPCGLVEDSSITIIGIPNGNSSFQIVLIGQELEEKPNPPIILYYNIRVPQDNMTEEPYIVQNTWTSNFGWGKEERCPARGSANQKVDGFALCNVQVGSNNEDNVNVGQPTSDITANVSSESAHRTGNFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWLVNNVKVAGSLNLLSVLAKGLPVMEDSDLVDVDKLKAPSITRKKLVLLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNRVNFELWSESQAYGDIQLMPFVDYYSLITLKTIAICIMGTKVMPSKYIMKTDDDAFVRIDEVLSSLRGKPSNGLLFGLISSKSSPERDKESKWYISEKEWPYDTYPPWAHGPGYVISRDIAKFIVNGHQERKLQLFKLEDVAMGIWIEQFKNGGKEVHYENDERFYNVGCESNYVLAHYQSPRLVLCLWDKLQKEHQPRCCE 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03253 654 Gene3D - 397 623 - -
Arst1g03253 654 FunFam Beta-1,3-galactosyltransferase GALT1 400 627 - -
Arst1g03253 654 Pfam Galactoside-binding lectin 191 378 IPR001079 GO:0030246
Arst1g03253 654 SMART Gal_bind_lectin_2 194 379 IPR001079 GO:0030246
Arst1g03253 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 191 380 IPR013320 -
Arst1g03253 654 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 346 608 IPR002659 GO:0006486|GO:0016020|GO:0016758
Arst1g03253 654 Pfam Galactosyltransferase 420 602 IPR002659 GO:0006486|GO:0016020|GO:0016758
Arst1g03253 654 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 190 380 IPR001079 GO:0030246
Arst1g03253 654 CDD GLECT 191 377 IPR001079 GO:0030246
Arst1g03253 654 Gene3D - 189 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03253 Arst-Chr1 93606567 93611500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03253 14 654 Glycosyltransferase AT3G06440 50.464 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03253 K20843 - gmx:100816729 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03253 1 93606567 93611500 Arst1g03253 1 93606567 93611500 ECH
Arst1g03253 1 93606567 93611500 Arst3g05152 3 126857672 126861734 PCT