Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04408 ATGCAGCGTGTATCAACAACGTTGTGCCGCAAGATAGCTCACCCAGCATGCGATGTATTCATCAACCACCGTGGCATCGACACCAAAAGAAACATTGCGGGCTTGTTGTATGACCGGTTAACGGCAATGGGTGTGAGGAGTTTCTTGGATAGTATGAACATGAAACCGGGGGACAGACTCTTTCACCATATTGATAGGGCCATTGTTGGAAGTAAAGTTGGTGTCGCTGTATTCTCGCCGCGCTATTGCGAGTCTTACTTTTGTCTCCATGAGCTCGCTCTGCTCATGGAGTCAAAGAAGAGGGTTGTCCCCATCTTCTACGATGTTAAGCCTTCGCAGCTTGTCGTTAAGGATAATGGAACTTGTCCGGCAAAAGAGCTCCGGAGATTTAGTTTGGCGCTTGAAGAAGCTAAGTATACCGTTGGATTAACCTTTGATCCTTTAAAAGGGGACTGGTCGGAGATATTAAAAAACGCTTCAGAAGCAGTGGTAATAAACTTACTTGAAGTTGAGGAAGAGAATAAGCGCATGAAGACAAGGCCTTGA 546 0.4597 MQRVSTTLCRKIAHPACDVFINHRGIDTKRNIAGLLYDRLTAMGVRSFLDSMNMKPGDRLFHHIDRAIVGSKVGVAVFSPRYCESYFCLHELALLMESKKRVVPIFYDVKPSQLVVKDNGTCPAKELRRFSLALEEAKYTVGLTFDPLKGDWSEILKNASEAVVINLLEVEEENKRMKTRP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04408 181 SMART till_3 16 149 IPR000157 GO:0007165
Arst3g04408 181 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 114 IPR035897 -
Arst3g04408 181 Gene3D - 13 173 IPR035897 -
Arst3g04408 181 PANTHER COP1-INTERACTING PROTEIN-RELATED 16 178 - -
Arst3g04408 181 ProSiteProfiles TIR domain profile. 15 163 IPR000157 GO:0007165
Arst3g04408 181 Pfam TIR domain 19 111 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04408 Arst-Chr3 119219533 119220296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04408 12 163 Miscellaneous Gene Families AT1G57670 29.940 3.18e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04408 - - gmx:100798207 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04408 3 119219533 119220296 Arst10g00408 10 3320649 3321309 PCT