Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03225 ATGGGTTCTTGGATTGTTCAGCTTCTTATGCTATTGCGCTTATTGAGCTTTGTGAACTCACAGGTTGAAACTGGTGGGGATTCACATTTAAAAGGGATTGTTGCCATTAATGCGAAATCGGTAATTGGAACCATTGATGATGATTTTGTGTGTGCAACTCTTGATTGGTGGCCCCCTCAGAAATGTGACTATGGTAGATGCAGTTGGGGCCTTGCATCTCTTCTCAATCTGGACCTCAACAATCAGCTCCTCTTAAATGCAGTGAAAGAGTTTTCGCCGTTGAAACTTAGATTGGGTGGCAGTTTGCAAGATAAGGTCATATATGGGACTGAAGACTATAACAAACCTTGTACTCCTTTTGTTAAGAATGAGTCCGAGATGTTTGGTTTCACTGAAGGGTGCCTCCCAATGGCTAGATGGGATGAGCTTAATATCTTTTTCAAAAAAGCAGGGGCTAAGATCGTCTTTGGATTAAATGCTCTTAATGGGAAAACAATAAAATCTGGTAAAGCAGTTGGACCTTGGAACTACACGAATGCCGAATCCTTTATTCATTACACCGTTGGAATGAATTACATAATTCATGGATGGGAGCTTGGCAATGAATTGAGTGGGAGTGGAGTTGGAACGAAAATTGATGCTGGGCAATATGCTTCTGATTTAGTTTCTCTACGAAACATAGTAGATAATGCATATAATGATGCCAAGCCTGAGCCACTAGTGATCGCTCCTGGAGGTTTCTTTGATGCAACTTGGTTCAAAGAATTTATAAGCAAAGCGGGAAAATCCTTGGATGTGGTTACCCACCACATCTATAACCTTGGGCCAGGTGTTGACGAGCACCTTGTGGAGAAAATTCTCAATCCTTCCTTTCTTGATGGAGAAGCAAGCACATTCAAAGCCCTCCAAAATTTAATTCAAAGTTCAGGAACCTCAGCAACAGCATGGGTTGGTGAGTCCGGAGGGGCTTACAACAGTGGCCATCATCTTGTGTCAGATGCATTTGTCTACAGCTTTTGGTATTTGGATCAGCTTGGCATGTCAGCTACTTATGATACTAAAACATATTGCAGACAGAGTTTGATAGGAGGAAATTACGGTTTACTCAATACTACAAATTTCCAGCCAAATCCAGACTACNGCAGTGCTCTTCTTTGGCACCGACTCATGGGAAGACATGTACTGTCAACAACTTTCTCTGGAACAAACAAAATAAGAGCATATGCCCACTGTGCAAAGCAATCCGGAGGGATCACAGTACTGTTGATCAATCTGGACAACAGCACAACCGTAGTGGCCGAAGTGTCATTGAGTAACGCCAATATTTTTAGGCACAGAAAGATGTCTATTAATTCAGAACTTATGGCAATACCTCTGCAAAGTGCGAATGAAAAATCAAGAGAAGAATACCATCTAACTCCACAGGATAGGAACATACATAGCCAAGTCATGGTTCTAAATGGGAAGACTCTAACGGTAAACACGGATAATGAGATCCCCACTTTGGAGCCTCTGTATGTGAACCCATCAGAGCCTATAACGGTTGCCCCTTTCTCTATTGTTTTTGCTCATATACCTGATGCCAATATCGCATCTTGCAGCTAG 1605 0.4206 MGSWIVQLLMLLRLLSFVNSQVETGGDSHLKGIVAINAKSVIGTIDDDFVCATLDWWPPQKCDYGRCSWGLASLLNLDLNNQLLLNAVKEFSPLKLRLGGSLQDKVIYGTEDYNKPCTPFVKNESEMFGFTEGCLPMARWDELNIFFKKAGAKIVFGLNALNGKTIKSGKAVGPWNYTNAESFIHYTVGMNYIIHGWELGNELSGSGVGTKIDAGQYASDLVSLRNIVDNAYNDAKPEPLVIAPGGFFDATWFKEFISKAGKSLDVVTHHIYNLGPGVDEHLVEKILNPSFLDGEASTFKALQNLIQSSGTSATAWVGESGGAYNSGHHLVSDAFVYSFWYLDQLGMSATYDTKTYCRQSLIGGNYGLLNTTNFQPNPDYXSALLWHRLMGRHVLSTTFSGTNKIRAYAHCAKQSGGITVLLINLDNSTTVVAEVSLSNANIFRHRKMSINSELMAIPLQSANEKSREEYHLTPQDRNIHSQVMVLNGKTLTVNTDNEIPTLEPLYVNPSEPITVAPFSIVFAHIPDANIASCS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03225 534 Gene3D Glycosidases 68 388 - -
Arst3g03225 534 Pfam Glycosyl hydrolase family 79, N-terminal domain 32 346 IPR005199 GO:0016020|GO:0016798
Arst3g03225 534 SUPERFAMILY (Trans)glycosidases 45 390 IPR017853 -
Arst3g03225 534 PANTHER HEPARANASE-RELATED 28 533 - -
Arst3g03225 534 FunFam heparanase-like protein 3 69 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03225 Arst-Chr3 63216589 63220662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03225 1 534 Glycoside Hydrolase AT5G61250 46.691 6.41e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03225 K07964 - gmx:100802477 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03225 3 63216589 63220662 Arst3g03225 3 63216589 63220662 ECH
Arst1g03105 1 92549728 92553329 Arst3g03225 3 63216589 63220662 PCT