Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03105 ATGGGTTCTTTGATTATAAGGCTTGTGGGTCTGTTCTACTTGGTGGTGAGTTTGTTGAGCTTCATTGGAGTGAATGCTATGCATGGAAGGGAAAGTAGTGGATATGAAGCAGTGAAAGGGATAATTTTGATACATGGGAAATCTCACATTGGAAGAATTGATGATGATTTTGTCTGTGCAACTCTTGATTGGTGGCCTCCTCAGAAATGTGACTATGGAACATGTAGCTGGGGTCATGCTTCTCTTCTCAACCTGGACCTCAACAACAAAATATTGTTAAATGCAGTAAAAGCATTTTCACCATTGAAGATTAGGTTAGGTGGCACCTTGCAAGATAAGGTCATATATGGGACTGAAGATAGTCCAAAACCATGTACTCCTTTTGTTAACAGCTCCTCTGAGATATTTGGATTCACTGAAGGATGCTTACCAATGCATAGATGGGATGAGCTGAACAGCTTTTTCCAAAAAGCAGGGGCTAAGGTTATCTTTGGATTGAATGCTCTTGCTGGAAGAACATTACAATCTGGTTCTGCAGTTGGACCATGGAACTCTTCCAATGCCGAATCTTTTATCCGTTACACTGTAAGAAAGAATTACAGCATTGCTGGTTGGGAATTTGGCAATGAATTGTGCGGGAGTGGAGTTGGAACAAGTGTTTCTGCAGATCAATATGCTTCTGATATTGCTGCATTAAGAAACATAATTCATGATGTATATAGAGGGATTAGGCATAAGCCACTGGTCATTGCTCCCGGTGGCTTCTATGATGCAAACTGGTTCCAGGAATTTGTAAACAAATCTGGTAAATCTGTTGATGTGGTATCTCACCACATATATAACCTTGGAGCAGGAGTTGATGAGCACCTAATTGAAAGAATTCTTGATCCATCATATCTTGATGGAGTGGCTAGCACATTCAGTGGCCTCAAAAACATACTTCAAAATTCAGCAACCAAAGCAAAAGCATGGGTTGGTGAGGCAGGAGGGGCTTACAACAGTGGCCACCATCTTGTGTCTGATGCATTTGTCTACAGCTTCTGGTATTTGGATCAGCTTGGAATGTCAGCTGTTTATGACACCAGAACATACTGCAGACAGAGTTTGGTTGGAGGAAACTATGGTTTACTAAACACTTCTACTTTTGTGCCAAATCCAGATTATTATAGTGCTCTTCTTTGGCACAGACTTATGGGAGTACGTGTCCTTGCAACTTCCTTCTATGGGACAAAGAAGATAAGAGCTTATGCACACTGTGCAAAGCAATCTAAAGGAATCACAATACTATTGCTGAATCTGGACAACAGCACCAGTGTTCATGCAAAAGTGGACTTCACATACTCAAAGACAGGTGCAACTGCCAGAGAAGAATACCATTTAACTGCACAGGATAGGGACTTACATAGCCAAACCACATTACTAAATGGAAAAGTTCTAACTGTCTCAGCAGCAGGGGATATTCCTCCTTTGAATCCTCTATATGTAAATCCATCAATGCCAATCATAGTTGGTCCTCTCTCTCTAGTATTTGCACATATACCAGATGTTGATATCCCAGCATGTTCTTAG 1569 0.4105 MGSLIIRLVGLFYLVVSLLSFIGVNAMHGRESSGYEAVKGIILIHGKSHIGRIDDDFVCATLDWWPPQKCDYGTCSWGHASLLNLDLNNKILLNAVKAFSPLKIRLGGTLQDKVIYGTEDSPKPCTPFVNSSSEIFGFTEGCLPMHRWDELNSFFQKAGAKVIFGLNALAGRTLQSGSAVGPWNSSNAESFIRYTVRKNYSIAGWEFGNELCGSGVGTSVSADQYASDIAALRNIIHDVYRGIRHKPLVIAPGGFYDANWFQEFVNKSGKSVDVVSHHIYNLGAGVDEHLIERILDPSYLDGVASTFSGLKNILQNSATKAKAWVGEAGGAYNSGHHLVSDAFVYSFWYLDQLGMSAVYDTRTYCRQSLVGGNYGLLNTSTFVPNPDYYSALLWHRLMGVRVLATSFYGTKKIRAYAHCAKQSKGITILLLNLDNSTSVHAKVDFTYSKTGATAREEYHLTAQDRDLHSQTTLLNGKVLTVSAAGDIPPLNPLYVNPSMPIIVGPLSLVFAHIPDVDIPACS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03105 522 PANTHER HEPARANASE-RELATED 36 521 - -
Arst1g03105 522 Gene3D Glycosidases 73 396 - -
Arst1g03105 522 FunFam heparanase-like protein 3 77 396 - -
Arst1g03105 522 Pfam Glycosyl hydrolase family 79, N-terminal domain 41 354 IPR005199 GO:0016020|GO:0016798
Arst1g03105 522 SUPERFAMILY (Trans)glycosidases 53 398 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03105 Arst-Chr1 92549728 92553329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03105 34 522 Glycoside Hydrolase AT5G61250 48.748 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03105 K07964 - gmx:100778008 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03105 1 92549728 92553329 Arst1g03105 1 92549728 92553329 ECH
Arst1g03105 1 92549728 92553329 Arst3g03225 3 63216589 63220662 PCT