Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02675 ATGACAACACTAATAACTAAGGTCCCTATTGGGTTTCTTTCTCTTCTCTTAATTATTACTATAGCTACCAAAGCTGCGGCTGGTAACTTCTATCAAGACTTTGAAGTAACATGGGGTGATAACCGTGCTAAGATCTTTAACGGTGGCCAGCTTCTTACACTGTCCTTGGACAGAGCCTCCGGCTCCGGATTTCGCTCCAAGAACGAGTATTTGTTTGCCAAACTTGACATGCAAATCAAACTCGTTCCTGGTAACTCCGCTGGCACCGTTACAACATACTATCTATCTTCGTTGGGTGGGACACATGACGAAATAGACTTTGAATTTCTGGGGAACTTGAGTGGAGATCCGTACATTCTTCACACAAACGTATTCACGCAAGGGAAAGGCAACAGAGAACAGCAGTTCTATCTATGGTTCGACCCCACCGCCGACTTCCACACCTATTCCATTCTTTGGAATCCTCACAACATCATATTCTCTGTGGACGGCACACCAATAAGGGAGTTCAAGAATTTAGAATCAAGAGGGGTCCCATTCCCAAAGAACCAACCCATGAGACTATACTCAAGCCTTTGGAATGCTGATGACTGGGCCACAAGGGGTGGGCTTGTGAAGACAGATTGGGCCCATGCCCCATTCACTGCCTCATACAGAAACTTCAATGCACCACCAGCCCAATCATGGATGGGCCAATCTCTTGATTCAACAGGCCTTGCAAGAATCCATTGGGTCCAAAGGAATTACATGATTTACAATTATTGCACTGATCTCAAACGCTTCCCACAAGGGCCTCCTCTTGAATGCTCACTTGCATGA 819 0.4579 MTTLITKVPIGFLSLLLIITIATKAAAGNFYQDFEVTWGDNRAKIFNGGQLLTLSLDRASGSGFRSKNEYLFAKLDMQIKLVPGNSAGTVTTYYLSSLGGTHDEIDFEFLGNLSGDPYILHTNVFTQGKGNREQQFYLWFDPTADFHTYSILWNPHNIIFSVDGTPIREFKNLESRGVPFPKNQPMRLYSSLWNADDWATRGGLVKTDWAHAPFTASYRNFNAPPAQSWMGQSLDSTGLARIHWVQRNYMIYNYCTDLKRFPQGPPLECSLA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02675 272 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 271 IPR013320 -
Arst3g02675 272 PIRSF EndGlu_transf 1 272 IPR016455 GO:0010411|GO:0016762|GO:0042546
Arst3g02675 272 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 26 269 IPR044791 GO:0004553
Arst3g02675 272 Pfam Glycosyl hydrolases family 16 31 210 IPR000757 GO:0004553|GO:0005975
Arst3g02675 272 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 226 269 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Arst3g02675 272 CDD GH16_XET 25 269 IPR016455 GO:0010411|GO:0016762|GO:0042546
Arst3g02675 272 ProSitePatterns Glycosyl hydrolases family 16 active sites. 104 114 IPR008263 GO:0004553|GO:0005975
Arst3g02675 272 Gene3D - 16 271 - -
Arst3g02675 272 FunFam Xyloglucan endotransglucosylase/hydrolase 17 271 - -
Arst3g02675 272 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 24 218 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02675 Arst-Chr3 39179087 39181701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02675 6 272 Glycoside Hydrolase AT4G25810 67.018 1.58e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02675 K14504 - gmx:100778237 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02759 1 89470658 89472018 Arst3g02675 3 39179087 39181701 PCT