Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02759 ATGGGGATTGAGGTACTTATTATTAATATTGTTCTCCTTATAGGGTTTGCGGTTGCTGCATCCGCAGGTAACTTCAACCAAGACTTTGAAATTACATGGGGTAATGACCGTGCCAAAGTCCTCAACAACGGACAGCTTCTGACGCTGTCCCTTGACAAGGCCTCCGGCTCCGGCTTCCGTTCCCGGAACGAGTACCTGTTTGGAAAGATCGACATGCAGCTTAAACTTGTTCCTGGTAATTCAGCAGGCACAGTCACAGCCTATTATCTAAGTTCACTTGGTGACACTCACGATGAGATAGACTTTGAATTTCTGGGGAACTTGAGTGGTGAACCATACACTCTGCACACGAATGTATTCACGCAAGGGAAAGGCAACAGAGAACAACAGTTCCATCTATGGTTCGACCCCACCAAGGACTTCCATACGTATTCTCTTCTTTGGAATCCTCAAAGCATCATATTCTCTGTGGACGGCACACCAATAAGGGAGTTCAAGAATTGGGAATCAAAAGGAGTTCCATTTCCCAAGAATCAAGCAATGAGGATATACTCAAGTCTATGGGACGCAGAAGATTGGGCCACAAGGGGTGGGCTTGTGAAGACTGATTGGACCCAAGCCCCATTCACAGCCTCATACAAAGGCTTCAATGCACAAGCTTGTGTTTGGACCTCTTCTTCAGGCTCCTCTTGTTCTTCAAAACAAGGCCAATCATGGTTCACTCAGTCACTTGACTCAACTGGGCAAGCAAGAATCCAGTGGGTTCAGAAGAACTACATGATCTACAATTACTGCACTGATACCAAACGATTCCCACAAGGCCTTCCTCCTGAATGCACCCTTGCATGA 849 0.4641 MGIEVLIINIVLLIGFAVAASAGNFNQDFEITWGNDRAKVLNNGQLLTLSLDKASGSGFRSRNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSLGDTHDEIDFEFLGNLSGEPYTLHTNVFTQGKGNREQQFHLWFDPTKDFHTYSLLWNPQSIIFSVDGTPIREFKNWESKGVPFPKNQAMRIYSSLWDAEDWATRGGLVKTDWTQAPFTASYKGFNAQACVWTSSSGSSCSSKQGQSWFTQSLDSTGQARIQWVQKNYMIYNYCTDTKRFPQGLPPECTLA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02759 282 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 20 279 IPR044791 GO:0004553
Arst1g02759 282 Pfam Glycosyl hydrolases family 16 26 205 IPR000757 GO:0004553|GO:0005975
Arst1g02759 282 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 281 IPR013320 -
Arst1g02759 282 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 19 213 IPR000757 GO:0004553|GO:0005975
Arst1g02759 282 PIRSF EndGlu_transf 1 282 IPR016455 GO:0010411|GO:0016762|GO:0042546
Arst1g02759 282 PRINTS Glycosyl hydrolase family 16 signature 115 128 IPR008264 GO:0004553|GO:0005975
Arst1g02759 282 PRINTS Glycosyl hydrolase family 16 signature 57 75 IPR008264 GO:0004553|GO:0005975
Arst1g02759 282 PRINTS Glycosyl hydrolase family 16 signature 133 150 IPR008264 GO:0004553|GO:0005975
Arst1g02759 282 FunFam Xyloglucan endotransglucosylase/hydrolase 12 281 - -
Arst1g02759 282 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 236 279 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Arst1g02759 282 Gene3D - 11 281 - -
Arst1g02759 282 Coils Coil 281 282 - -
Arst1g02759 282 CDD GH16_XET 20 279 IPR016455 GO:0010411|GO:0016762|GO:0042546
Arst1g02759 282 ProSitePatterns Glycosyl hydrolases family 16 active sites. 99 109 IPR008263 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02759 Arst-Chr1 89470658 89472018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02759 3 282 Glycoside Hydrolase AT4G25810 72.183 1.24e-153 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02759 K14504 - gmx:100807063 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02759 1 89470658 89472018 Arst3g02675 3 39179087 39181701 PCT