Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02791 ATGGCTACCGTCGAACCAATCCAGAACGGCACCTCCAACAATGTTTCCCAGCCACTTGCACCGGCAAATGCCGCCGCCGCCGCCGAACAACCCTCCACAAACCCTTCAACCGATGCACCCGAATCCGAGGCGGTTCCGGCACCTGAAGCTGCCGCAACCGGCAGTACCACCACCACTCCGCCGGAGAAGAGATGGCCTGGTTGGCCCGGCCACTGCGTGTTCCGGCTCATCGTGCCGGTGCTCAAAGTCGGCAGCATAATTGGGCGGAAGGGCGAGCTCATTAAGAAGACATGTGAAGAGACTCGAGCTCGCATTCGCGTTCTAGATGGTGCTGTCGGCACTTCCGATCGAATCGTACTTATATCAGGGAAGGAAGATCCAGAGACAGCATTCTCTCCTGCAATGGATGCTGTAATGAGGATTTTTAAGCGTATATCGGGATTATCTGAAACTGAGGGCGAGAATATGACATTGGGAGCTTCCGGGGGCAATTTTTGTTCTATCCGTTTATTGGTAGCATCAACACAGGCCATCAATTTGATTGGAAAGCAGGGCTCGTTAATCAAATCCATACAGGAAAGCACTGCTGCTTCTGTTAGAGTATTGTCAGGAGACGAGGTGCCATTTTATGCTGCGGCCGATGAAAGGATTGTAGAGCTGCAGGGAGAAGTCTTGAAGGTGCTTAAGGCACTGGAAGCAGTAGTTGGGCACCTGAGGAAATTTTTGGTGGATCATACTGTTCTTCCCCTATTTGAGAAAACTTACAATGCAACAATCTCCCAAGACCACCAGGTGGATACCTGGGCTGACAAGCCATCGCTGTATAGTGCTTCCCAACCTTCCATTGTTGCTGATGTTTCTCTTCCAACAAAAAGGGATGCTCTCTTTGTTGAGCGTGAGAATCAATTGGATTCATTACTCCCTTCCTCCTCAGTGTCACTGTACAGGCAAGATTCTTCACTTTCTGGTCTTCGTTCTTCAGCTCTGGGCCGTGCTGCTGGTGCTCCTATTGTTACTACGGTAATACAAACAATGCAAATACCACTGTCCTATGCAGAGGACATAATTGGTATACAAGGGACTAATATTGATTACATTCGCCGTACTAGTGGAGCCATATTGACGGTGCAGGAGAGCAGAGTGCCTGATGAAATTATTGTGGAAATAAAAGGCACCTCATCTCAGGTTCAGTTGGCACAACAACTGATTCAGGAAGTGATAACTAATCACAAAGAGCCTGCCGCTAGTGCTTACAGCAGGTTAGATGCCGATCTGAGGTCTACTTACGCCCAATTGGGCAGTACATCATACTCATCATCTTCGTTGTCCACGCAACCTTACAGCGGTTATGGTTCTTCTGGTCTTGGAGGCTACAGTTCTTTCAGACTTTAA 1392 0.4892 MATVEPIQNGTSNNVSQPLAPANAAAAAEQPSTNPSTDAPESEAVPAPEAAATGSTTTTPPEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDGAVGTSDRIVLISGKEDPETAFSPAMDAVMRIFKRISGLSETEGENMTLGASGGNFCSIRLLVASTQAINLIGKQGSLIKSIQESTAASVRVLSGDEVPFYAAADERIVELQGEVLKVLKALEAVVGHLRKFLVDHTVLPLFEKTYNATISQDHQVDTWADKPSLYSASQPSIVADVSLPTKRDALFVERENQLDSLLPSSSVSLYRQDSSLSGLRSSALGRAAGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRVPDEIIVEIKGTSSQVQLAQQLIQEVITNHKEPAASAYSRLDADLRSTYAQLGSTSYSSSSLSTQPYSGYGSSGLGGYSSFRL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02791 463 CDD KH-I_PEPPER_rpt2_like 169 239 - -
Arst1g02791 463 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 64 139 IPR036612 GO:0003723
Arst1g02791 463 ProSiteProfiles Type-1 KH domain profile. 165 234 - -
Arst1g02791 463 MobiDBLite consensus disorder prediction 1 20 - -
Arst1g02791 463 MobiDBLite consensus disorder prediction 1 66 - -
Arst1g02791 463 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 338 409 IPR036612 GO:0003723
Arst1g02791 463 Gene3D - 71 242 - -
Arst1g02791 463 Pfam KH domain 74 126 IPR004088 GO:0003723
Arst1g02791 463 Pfam KH domain 343 405 IPR004088 GO:0003723
Arst1g02791 463 Pfam KH domain 168 234 IPR004088 GO:0003723
Arst1g02791 463 CDD KH-I_PEPPER_rpt1_like 71 139 - -
Arst1g02791 463 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 159 248 IPR036612 GO:0003723
Arst1g02791 463 ProSiteProfiles Type-1 KH domain profile. 71 138 - -
Arst1g02791 463 Gene3D K Homology domain, type 1 339 414 IPR036612 GO:0003723
Arst1g02791 463 SMART kh_6 164 239 IPR004087 GO:0003676
Arst1g02791 463 SMART kh_6 70 146 IPR004087 GO:0003676
Arst1g02791 463 SMART kh_6 339 408 IPR004087 GO:0003676
Arst1g02791 463 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 60 433 - -
Arst1g02791 463 ProSiteProfiles Type-1 KH domain profile. 340 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02791 Arst-Chr1 89704260 89708220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02791 K21444 - gmx:100807645 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02791 1 89704260 89708220 Arst1g02791 1 89704260 89708220 ECH
Arst1g02791 1 89704260 89708220 Arst4g01747 4 29564089 29569860 PCT