Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01032 ATGGACTCAAATCAAGTTTCAGGGGTTTTTGAAGATGGGGTTGGTTTTGGTCTTGGTGTTGATGGTGAGACCTGTGAAGAGGAAAGGAAGAGATCAAAGATTGGGAGCTTGAAGAAGAAGGCCATAAGTGCTTCATGCAGGTTCACTCATTCTCTGAAGAAGAGAGGGGGGAAAAGCAGAATTGTAGATGATAACAGTAACAACAACAATAGGGTTCACATTGAAGATGTGAGAGATGCACAAGAGGAATCAGCTGTGCAAAAATTGCGTCTGAAACTGCTACAAAGGTGTTCTTTGCGTCCAACTCATGATGATTATCATGCATTGTTAAGGTTTCTGAAAGCAAGGGACTTTGACATTGAGAAGACTATTCAGATGTGGGAAGACATGTTAAGCTGGAGAAAAGAATATGGAACTGATACCATCCTTCAGGATTTTGAATTTGAAGAGTTGGAAGAAGTACTGCAGCATTATCCTCAAGGGTATCATGGAGTTGACAAAGAAGGTAGGCCAGTTTACATTGAGAGGCTTGGGAAAGCTCATCCGAGCCGCTTGATGCGCATTACCACAATAGATAGATATTTGAAGTACCATGTTCAGGAGTTTGAGAGAGCTCTACAGGAGAAATTTCCAGCATGTTCTGTTGCTTCCAAGAGACGGATTTCTTCAACCACAACAATTTTGGACGTGCAGGGCTTGGGAATGAAAAATTTCTCACCTACTGCTGCAAATCTCTTGGCTGCTATGACAAGAATAGATAACAATTACTATCCTGAGACATTACATCGGATGTATATAGTAAATGCTGGTACTGGCTTCAAGAAGATGCTTTGGCCTGCTGCACAGAAGTTTCTTGATCCCAAAACTATTGCAAAGATACAGGTTTATGAACCCAAGTCTTTATGCAAGTTACTGGATGTCATTGACTCAAGTCAGTTGCCAGATTTTTTGGGTGGTTCATGTACATGTCCTGGAGAAGGTGGATGTCTAAGGTCTAGCATGGGTCCATGGAAAGATCCTGATGTCATGAAGGTGGTACATAGTGTGGAGGCAACTGTTGTGAGACAAATCACTGGACTACCCGGTGAACAAGGGAAATCAGACTCTTTTTGGATTCACTCACATAAGGAGCAATGGGGTGATGCATCACCGGTAGAATCAGGGTCTGATATTGATGATTGTTGCTCACCATACATACAAAGAAGCTTTACCTTTCCTCGGTTAGCCCCAGTTCTTGAAGAACTCAGGGTATCAGATAGCTACTTCAGTTGTAATGGTAGCACACCTAAAGCTGAGAAAGTGCCCACAAGTGATGAATTTCATCGTCCTAACAAACAGTCATTGCACAATGATGTGGGGAAAATTGTTTCTAGCGAAAACTGTCAAGAAACCTTTTTTGGCATCAGCAATTGGTTCAGTCTTGTCAAAGCAATGGTGGCGAAAACTAAGTTCTTAAATGTGTCAAGAGTGCTTACATATGTATTGCAAAGACTAGTTACATTCTTCTGCAGTTTAAGATTTGAATTTGTTAGAATACAGAACGATGTTTTGCCGTCTATCCCCATCGAACCTAACACTGATAACATTTTGGCAACTAGTGAAGTTGTGTCCGAAAGGGATCATATTCTACCATGTTTACAACGCCTTCAGAGACTAGAAAATGCTGTTGAGGAACTTCGCGATAAACCAGCAAGTATACCTCTTGAAAAGGATCAAATGCTTAAGGGTTCGTTGGATAGGATTAAATCTGTTGAGTTTGATCTTGAAAAGACTAAAAGGGTAGTACATGCTATGGTGATGAAGCAACTTGAGATTTCAGATCTGCTCGAGAAGTTTCAGGTGTCCAAATGTCGAAAAAGAAGGCTTTTCTGTTAA 1875 0.4107 MDSNQVSGVFEDGVGFGLGVDGETCEEERKRSKIGSLKKKAISASCRFTHSLKKRGGKSRIVDDNSNNNNRVHIEDVRDAQEESAVQKLRLKLLQRCSLRPTHDDYHALLRFLKARDFDIEKTIQMWEDMLSWRKEYGTDTILQDFEFEELEEVLQHYPQGYHGVDKEGRPVYIERLGKAHPSRLMRITTIDRYLKYHVQEFERALQEKFPACSVASKRRISSTTTILDVQGLGMKNFSPTAANLLAAMTRIDNNYYPETLHRMYIVNAGTGFKKMLWPAAQKFLDPKTIAKIQVYEPKSLCKLLDVIDSSQLPDFLGGSCTCPGEGGCLRSSMGPWKDPDVMKVVHSVEATVVRQITGLPGEQGKSDSFWIHSHKEQWGDASPVESGSDIDDCCSPYIQRSFTFPRLAPVLEELRVSDSYFSCNGSTPKAEKVPTSDEFHRPNKQSLHNDVGKIVSSENCQETFFGISNWFSLVKAMVAKTKFLNVSRVLTYVLQRLVTFFCSLRFEFVRIQNDVLPSIPIEPNTDNILATSEVVSERDHILPCLQRLQRLENAVEELRDKPASIPLEKDQMLKGSLDRIKSVEFDLEKTKRVVHAMVMKQLEISDLLEKFQVSKCRKRRLFC 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01032 624 Gene3D - 138 359 IPR036865 -
Arst1g01032 624 Gene3D - 25 137 - -
Arst1g01032 624 Pfam CRAL/TRIO, N-terminal domain 105 129 IPR011074 -
Arst1g01032 624 SUPERFAMILY CRAL/TRIO N-terminal domain 79 145 IPR036273 -
Arst1g01032 624 SMART CRAL_TRIO_N_2 105 130 IPR011074 -
Arst1g01032 624 Pfam CRAL/TRIO domain 156 319 IPR001251 -
Arst1g01032 624 SUPERFAMILY CRAL/TRIO domain 149 347 IPR036865 -
Arst1g01032 624 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 150 325 IPR001251 -
Arst1g01032 624 CDD SEC14 161 319 IPR001251 -
Arst1g01032 624 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 26 611 - -
Arst1g01032 624 SMART sec14_4 150 322 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01032 Arst-Chr1 10314990 10320131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01032 109 335 Acyl Lipid Metabolism Gene Families AT1G55840 30.131 6.36e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01032 K26544 - gmx:100776629 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g01032 1 10314990 10320131 Arst1g01032 1 10314990 10320131 ECH
Arst5g00448 5 3803044 3804903 Arst1g01032 1 10314990 10320131 PCT