Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00883 ATGGTAAGTGTATTTGCTGATTTGGAAAAGATGCCTGGTTTTGTTGCTGGAAAGAAGAGATCTACAGGCCGAAACATGTGTTTCACCAATTTGGCCAATCAAGACAAGTTAACTTGTTTGCAAACCAATCATTTCTTTGCCTCTGAGGTACCGGAAAACGATGATAGCCCCATTCTACCTGGTCTGCCTGATGATGTGGCAAAACATTGCCTTGCACTTGTGCCTCGTTCTAACGTCCCAACTATTGGTGGTGTCTGTAAGAGATGGAGATCATTTATTCAAAGCAAAGAGTTCATTACTGTGCGAAAATTGGCAGGGATGGTTGAGGAATGGCTCTATTTCTTAACAATGGATACTGAAGGAGAGGGAACTCATTGGGAGGTTATGGATCGTCCCAGTCATAAATGCCAAGCTCTTCCACCGATGCCTGGTCCGGTAAAGGCTGGATTCGGAGTGGTTGTTCTTAATGGAAAGCTTCTTGTTATTGCTGGATATTCAACTACAGATAGAAGTACCTTTGCCTCAGCAGAGGTTTACCAATATGACTCGCTCCTCAACAATTGGAGCAGACTATCAAAAATGAATGTGGCTCGTTATGACTTTGCATGTGCCGAAGTCAATGGCTTGGTTTATGCTGTAGGAGGCTGTGGATTGGATGGTGAAATTCTCTCTAGTGCTGAGGTGTACGACCCTGACACCGACAAATGGACACTGATAGAGAGTGTCCGGCGCCCAAGATGGGGTTGCTTTGCCTGTTCATTGGATGGTAAGCTCTATGTCATGGGTGGAAGGTCGAGCTTTACAATTGGAAACTCCAAGTTTGTTGATGTTTATGACCCTGAAGTCCACAGCTGGGGTGAGTTCAAGAACGGCTGTGTTATGGTCACAGCGCACGCAGTATTAGGAAAGAAATTGTTCTGTATGGAGTGGAAGAACCAGAGGAAGCTAGCAATATTCTGTTCTGAAGACAATTCGTGGAAAATGGTACCACTTCCACTCACTGGTAGCTCCAGTGTTGATTTTAGATTTGGGATATTTGATGAAAAGCTGTTGCTATTCTCACTGGAAGCAGGACCCTCTTATCAAACTTTGTTGTATGATCCAAATGCAGCTAAAGGGTCAGAGTGGCAAATTTCTGATATAAAACCATCTGGTGTGTTCTTGTGCAGTGTAACAATCAAGGCATGA 1188 0.4402 MVSVFADLEKMPGFVAGKKRSTGRNMCFTNLANQDKLTCLQTNHFFASEVPENDDSPILPGLPDDVAKHCLALVPRSNVPTIGGVCKRWRSFIQSKEFITVRKLAGMVEEWLYFLTMDTEGEGTHWEVMDRPSHKCQALPPMPGPVKAGFGVVVLNGKLLVIAGYSTTDRSTFASAEVYQYDSLLNNWSRLSKMNVARYDFACAEVNGLVYAVGGCGLDGEILSSAEVYDPDTDKWTLIESVRRPRWGCFACSLDGKLYVMGGRSSFTIGNSKFVDVYDPEVHSWGEFKNGCVMVTAHAVLGKKLFCMEWKNQRKLAIFCSEDNSWKMVPLPLTGSSSVDFRFGIFDEKLLLFSLEAGPSYQTLLYDPNAAKGSEWQISDIKPSGVFLCSVTIKA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00883 395 Pfam F-box domain 61 98 IPR001810 GO:0005515
Arst10g00883 395 Gene3D - 95 391 IPR015915 GO:0005515
Arst10g00883 395 Pfam Kelch motif 148 195 IPR006652 GO:0005515
Arst10g00883 395 Pfam Kelch motif 248 285 IPR006652 GO:0005515
Arst10g00883 395 Pfam Kelch motif 197 240 IPR006652 GO:0005515
Arst10g00883 395 SUPERFAMILY Kelch motif 109 362 IPR015915 GO:0005515
Arst10g00883 395 SMART fbox_2 62 102 IPR001810 GO:0005515
Arst10g00883 395 PANTHER OS02G0202900 PROTEIN 17 391 IPR045887 -
Arst10g00883 395 SUPERFAMILY F-box domain 46 98 IPR036047 GO:0005515
Arst10g00883 395 CDD F-box_AtAFR-like 58 102 - -
Arst10g00883 395 SMART kelc_smart 158 208 IPR006652 GO:0005515
Arst10g00883 395 SMART kelc_smart 209 256 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00883 Arst-Chr10 7961789 7963618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00883 62 240 Miscellaneous Gene Families AT4G33900 29.534 3.57e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00883 - - gmx:100802912 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00883 10 7961789 7963618 Arst3g05987 3 133402328 133404132 PCT