Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3168 ATGGAGCAATTCTGGTCTGGGAGTGCCATCAATGAAAACAAAGGGATGGTAGATAATTTGCAGCGTTATGGAATAATCTCCTCTAGAAAGGTTGGTGAAGTAATGGAAACCATTGATAGAGCTTTGTTTGTACCCAATGGAGCCCAACCTTATGTTGACAGTCCCATGCCGATAGGCTACAATGCCACTATATCTGCACCGCATATGCATGCTACCTGCCTTCAGTTGCTGGAGGATAAATTGCAACCAGGGATGCGTGCTCTGGATGTTGGCTCTGGAACAGGGTACCTGACTGCATGCTTTGCCTTGATGGTTGGACCCCAAGGCCATGCTATTGGTGTGGAACATATTCCTGAATTGGTTTCTTTTTCAATTGAGAATATTAAAAAAAGTGCTGCAGCTCAACCTTTGAAAGACGGTTCCCTTTCTGTGCATGTTGGTGATGGAAGGCAAGGTTGGCCTGAGTTTGCTGCTTATGATGCCATTCACGTTGGAGCAGCGGCATCAGAAATTCCCCAACCACTTATTGAGCAGTTGAAGGCGGGTGGTAGAATGGTTATTCCTGTTGGAAACCTATTTCAAGATTTAAAGGTGGTGGATAAGAACTCTGATGGTTCTATCAGTATCAGGACTGAGACTTCTGTTCGCTATGTTCCTCTCACTAGCAGAGAAGCTCAACTGCGAGATTAG 690 0.4522 MEQFWSGSAINENKGMVDNLQRYGIISSRKVGEVMETIDRALFVPNGAQPYVDSPMPIGYNATISAPHMHATCLQLLEDKLQPGMRALDVGSGTGYLTACFALMVGPQGHAIGVEHIPELVSFSIENIKKSAAAQPLKDGSLSVHVGDGRQGWPEFAAYDAIHVGAAASEIPQPLIEQLKAGGRMVIPVGNLFQDLKVVDKNSDGSISIRTETSVRYVPLTSREAQLRD* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3168 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 3 228 IPR000682 GO:0004719|GO:0036211
Apr9g3168 229 CDD AdoMet_MTases 86 189 - -
Apr9g3168 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 197 IPR029063 -
Apr9g3168 229 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 224 - -
Apr9g3168 229 Gene3D Vaccinia Virus protein VP39 5 229 IPR029063 -
Apr9g3168 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 3 228 - -
Apr9g3168 229 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 12 226 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3168 Apr-Chr9 38455978 38458974 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3168 K00573 - gmx:100527082 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3168 9 38455978 38458974 Apr9g3168 9 38455978 38458974 ECH
Apr9g3168 9 38455978 38458974 Apr1g0245 1 2661754 2664450 PCT