Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0245 ATGAGCGTAACGTACCACTACTACCCTTTCCCTGCGTTAGCGTTTGGTTGCCGCTACTGTTATGCATATGCAAGTGCTACACGCATAACTACAACTACACGCGCTCACACTCTCTCCAACCACACACGTGTTTCTTTGTCACCTCCTCACTCTTCCACCTTCTCCTTCATCACCAACCTCTTCTTCTTCCCAAACCCTAATTTCCTCACGGGGAACACTCTCTTCCTTCGCATGCAGCGGTTCTGCTCTGTGAGTGGGATGAGTAAGAACAAAGCCATGGTGGAAAGGTTGCAGCGTTATGGAGTGATTTCATCGAGTAAGGTGGCTGAGGTAATGGAGACAGTTGATAGAGCTTTGTTTGTACCTGATGGAGCTTCACCTTATGATGACAGCCCCATGGCCATAGGGTACAATGCCACTATATCTGCACCGCATATGCATGCCACGTGCCTTCAGTTGCTGGATGATAATTTGCAGCCTGGGATGCATGCTCTGGACATTGGTTCTGGAACAGGATACCTGACTGCGTGCTTTGGCTTGATGGTTGGACCCCAAGGACGTGCTGTTGGAGTGGAGCATATTCCTGAATTGGTTTCTTTTTCAATAGAGAATATTCATAAAAGTGCTGCAGCTATGCTGTTGAAAGATGGTTCCCTTTCTGTTCATGTTGGTGATGGAAGGCAAGGTTGGCCAGAGTTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCAGCACCGGAAATTCCCCAACCACTTATTGACCAGCTGAAGCCTGGAGGTAGAATGGTGATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGTGTTCGCACTGAGACCTCTGTTCGTTATGTGCCCCTCACTAGTCGAGAAACTCAACTTCGAGGTTACTAA 924 0.4729 MSVTYHYYPFPALAFGCRYCYAYASATRITTTTRAHTLSNHTRVSLSPPHSSTFSFITNLFFFPNPNFLTGNTLFLRMQRFCSVSGMSKNKAMVERLQRYGVISSSKVAEVMETVDRALFVPDGASPYDDSPMAIGYNATISAPHMHATCLQLLDDNLQPGMHALDIGSGTGYLTACFGLMVGPQGRAVGVEHIPELVSFSIENIHKSAAAMLLKDGSLSVHVGDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISVRTETSVRYVPLTSRETQLRGY* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0245 307 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 275 IPR029063 -
Apr1g0245 307 TIGRFAM pimt: protein-L-isoaspartate O-methyltransferase 88 303 IPR000682 GO:0004719|GO:0036211
Apr1g0245 307 CDD AdoMet_MTases 165 266 - -
Apr1g0245 307 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 224 239 IPR000682 GO:0004719|GO:0036211
Apr1g0245 307 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 9 307 IPR000682 GO:0004719|GO:0036211
Apr1g0245 307 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 9 307 - -
Apr1g0245 307 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 89 301 - -
Apr1g0245 307 Gene3D Vaccinia Virus protein VP39 84 307 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0245 Apr-Chr1 2661754 2664450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0245 K00573 - gmx:100810913 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0245 1 2661754 2664450 Apr1g0245 1 2661754 2664450 ECH
Apr9g3168 9 38455978 38458974 Apr1g0245 1 2661754 2664450 PCT