Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3139 ATGGCCTCACCAGCTTGGACCCATCATCAGCGTGACAACAACATACCCATCTCCATCTCTGAACCTTCCACTAATGCTCCTCCTCCTAAAGGAATCACTACAATGGAAAGGACCCAATCACGCCACCCTTTGGACCCTCTATCTGCTGCCGAAATCTCTGTGGCTGTGGCAACTGTGAGAGCAGCTGGAACCACTCCTGAGCTCAGAGACAGTATGCGCTTTATTGAAGTAGTTTTATTGGAACCAGATAAACATGTTGTTGCACTGGCAGATGCTTATTTCTTTCCACCTTTCCAATCATCATTACTTCCTAGAACTAACGGAGGGCCTGTAATTCCCTGTAAACTCCCTCCAAGACGTGCTAGACTTGTTGTTTACAGTAAAAAGACAAATGAGACTAATATATGGATTGTTGAGTTATCTCAAGTACATGCAGTAACTCGTGGAGGTCATCACCGTGGAAAAGTAATTTCATCATATGTTGTTCCAGATGTTCAACCTCCAATTGATGCTATGGAGTATGCAGAATGTGAAGCTGTTGTTAAAGATTTTCCTCCATTTAGAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTTGATACCTGGTGTGTTGGTAATTACAGTGAAGCTGATAGTCCCAGTCGTAGACTTGCTAAGCCACTCATATTTTGCAGAGCAGAGAGTGACAGCCCTATGGAAAATGGGTATGCACGCCCAGTTGAGGGCATCAATGTGCTTGTTGATATGCAAAACATGGTGGTAATTGAGTTTGAAGACCGTAAACTTGTTCCTCTGCCTCCGGTTGATCCCTTGAGGAACTACACACCTGGTGAAACAAGAGGTGGAACTGATAGAAGTGATGTAAAGTCCTTGCAAATTATTCATCCTGAAGGTCCAAGCTTTCGTGTCAGAGGGTCTTATGTTGAATGGCAAAAGTGGAACTTTCGTATTGGATTCACACCCAGAGAAGGTTTGGTTATATATTCTATTGCATATGTTGATGGTAGTCGAGGGCGGAGGCCTGTGGCTCATAGACTCAGTTTTGTGGAGATGGTTGTGCCCTATGGAGATCCAAATGAACCACATTACAGGAAGAATGCTTTTGATGCTGGAGAAGATGGCTTGGGAAAAAATGCACATTCTCTCAAGAAGGGATGTGATTGTTTGGGCTACATCAAATACTTTGATGCTCATTTCACAAATTTCACTGGTGGAGTTGAGACTATTGAACATTGTGTATGCTTGCAAGAAGAGGACCATGGAATTCTGTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCTAGAAGACTTTCAGTTTCTTTTATGTGTACTGTGGCTAATTATGAGTATGGATTTTATTGGTACTTTTATCAGGATGGAAAAATTGAAGCTGAAGTTAAGCTAACTGGAATTTTAAGCCTAGGAACCCTGTTGCCTGAAGAGTTTCGAAAATATGGAACCATGATTGCACGAAGTCTATATGCTCCAGTTCATCAACACTTTTTTGTAGCTCGCATGGACATGGCTGTGGATTGTAAACCTGGTGATGCTTTAAATCAGGTTGTGGAGATCAATGCCAAAGTTGAGGAACCCGGGGAGAACAACGTTCACAACAATGCATTTTATGCTGAAGAGACTCTGCTCACATCTGAATTGGAAGCCATGCGTGATTGCAATCCTTTGACTGCTCGACACTGGATTGTAAGGAACACGAGAACAAGCAATAGAACTGGACAGTTGACAGGCTATAAGCTTGTACCTGGTATAAACTGCTTGCCATTAGCAGGTTCTGAGGCCAAGTTTTTAAGAAGAGCTTCTTTCTTGAGGCATAATCTTTGGGTAACACCATTTTCACACGATGAAATGTTCCCTGGAGGAGAATTTCCTAATCAAAATCCACGTGCCAGCGAAGGACTAGCTACATGGGTTAAGCAGAACAGATCTTTGGAAGAAACTGATATAGTTCTTTGGTATGTATTTGGAATCACACACGTCCCTCGTTTAGAAGACTGGCCAGTTATGCCAGTAGAACGCATCGGATTCATGCTGGTGCCTCATGGATTCTTCAATTGTTCCCCTGCAGTGGATGTCCCGCCAAGTTCATGTGAATTGGATTCTAAAGATAATAATGATAATGGGCCTTCCAAGCAAATTCAGGGTGGATTTGTGGCAAAACTATAG 2211 0.4288 MASPAWTHHQRDNNIPISISEPSTNAPPPKGITTMERTQSRHPLDPLSAAEISVAVATVRAAGTTPELRDSMRFIEVVLLEPDKHVVALADAYFFPPFQSSLLPRTNGGPVIPCKLPPRRARLVVYSKKTNETNIWIVELSQVHAVTRGGHHRGKVISSYVVPDVQPPIDAMEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDTWCVGNYSEADSPSRRLAKPLIFCRAESDSPMENGYARPVEGINVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTPGETRGGTDRSDVKSLQIIHPEGPSFRVRGSYVEWQKWNFRIGFTPREGLVIYSIAYVDGSRGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIEHCVCLQEEDHGILWKHQDWRTGLAEVRRSRRLSVSFMCTVANYEYGFYWYFYQDGKIEAEVKLTGILSLGTLLPEEFRKYGTMIARSLYAPVHQHFFVARMDMAVDCKPGDALNQVVEINAKVEEPGENNVHNNAFYAEETLLTSELEAMRDCNPLTARHWIVRNTRTSNRTGQLTGYKLVPGINCLPLAGSEAKFLRRASFLRHNLWVTPFSHDEMFPGGEFPNQNPRASEGLATWVKQNRSLEETDIVLWYVFGITHVPRLEDWPVMPVERIGFMLVPHGFFNCSPAVDVPPSSCELDSKDNNDNGPSKQIQGGFVAKL* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3139 736 Pfam Copper amine oxidase, N2 domain 42 135 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr9g3139 736 SUPERFAMILY Amine oxidase catalytic domain 290 709 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr9g3139 736 SUPERFAMILY Amine oxidase N-terminal region 40 167 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr9g3139 736 Gene3D Copper amine oxidase, catalytic domain 283 709 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr9g3139 736 Gene3D - 30 170 - -
Apr9g3139 736 MobiDBLite consensus disorder prediction 711 736 - -
Apr9g3139 736 MobiDBLite consensus disorder prediction 713 727 - -
Apr9g3139 736 Gene3D - 172 274 - -
Apr9g3139 736 SUPERFAMILY Amine oxidase N-terminal region 166 284 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr9g3139 736 Pfam Copper amine oxidase, enzyme domain 296 704 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr9g3139 736 Pfam Copper amine oxidase, N3 domain 167 270 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Apr9g3139 736 PANTHER AMINE OXIDASE 25 724 - -
Apr9g3139 736 MobiDBLite consensus disorder prediction 1 36 - -
Apr9g3139 736 MobiDBLite consensus disorder prediction 273 292 - -
Apr9g3139 736 PANTHER COPPER AMINE OXIDASE 25 724 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3139 Apr-Chr9 38228405 38233510 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3139 K00276 - zju:107418311 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3139 9 38228405 38233510 Apr9g3139 9 38228405 38233510 ECH
Apr9g3139 9 38228405 38233510 Apr1g0774 1 9353423 9363722 PCT