LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr1g0774	ATGGCCTCAGCTTCGCAAAAGGCGACGCCACCATCACCATCTTCTTCTTCTTGCTGTTCCCCCATTCCCCGCGTAGCCGCTCCACCGCAAGAGTGGTCCAACACCAACAAGGTTCGCACCGTCGATTCGCTTCCTCAACCTTCGACCAATGCTCCTCTTCCTAAGGGAGTCACTGCAATGCCAAGGGCGCAGTCCAGCCATCCTTTGGACCCTTTATCTGCTGCTGAAATCTCTGTGGCAGTGGCAACTGTGAGGGCTGCTGGAGCTACTCCTGAGCTTAGGGATAGTATGCGGTTCATTGAAGTAGTTTTGCTGGAACCAGATAAAAATGTTGTTGCGCTGGCTGATGCATATTTCTTTCCTCCTTTCCAACCATCGTTACTTCCTAGAACTAAAGGTGGTCCTGTAATTCCCACTAAACTCCCGCCAAGATGTGCTAGGCTTGTTGTTTACAATAAGAAATCCAATGAGACTAGTGTATGGATTGTTGAACTGTCACAAGTACATGCGGTAACTCGAGGTGGTCATCATCGAGGAAAAGTAATTTCATCACATGTTGTTCCTGATGTTCAGCCTCCAATGGATGCTGTGGAGTATGCAGAATGTGAGGCTATTGTTAAAAGTTTTCCCCCATTTATAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTTGATCCCTGGTGTGTTGGTTATTACAGTGAAGCAGATGCTCCTGGGAGAAGACTTGCTAAACCACTCATATTTTGTCGATCTGAAAGTGACTGCCCTATGGAAAATGGCTATTCTCGCCCTGTTGAGGGCATTTATGTTCTTGTTGACATGCAAAACATGGTGGTGATAGAGTTTGAAGACCGTAAACTTGTTCCTCTTCCTCCAGTTGATCCCTTGAGGAACTATACCCCTGGTGAAACCAGAGGTGGCTCTGATAGAAGTGATGTAAAACCCTTGCAAATTCTTCAGCCTGATGGTCCAAGCTTCCGTGTCAATGGTTATTATGTTGAATGGCAGAAGTGGAATTTTCGTGTTGGATTCACACCCAAAGAGGGTTTGGTTATATATTCTGTTGCATATGTTGATGGCAGTCGTGGAAGAAGGCCTGTTGCTCATAGACTGAGTTTTGTGGAGATGGTTGTACCCTATGGAGATCCAAACGACCCACATTACAGAAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGAAAAAATGCACATTCTCTCAAGAAGGGATGTGATTGTTTGGGCTACATCAAGTATTTTGATGCTCACTTCACAAATTTCACTGGTGGAGTGGAAACAATTGAAAATTGTGTTTGTTTGCATGAAGAGGATCATGGAATTCTCTGGAAGCATCAAGACTGGAGAACTGGCCTAGCAGAAGTCCGAAGATCTAGAAGACTTTCAGTTTCGTTCATATGTACTGTGGCTAACTATGAGTATGGATTTTTTTGGCACTTTTATCAGGATGGAAAGATTGAAGCTGAAGTCAAGCTAACTGGAATTCTCAGCCTAGGAGCCTTGCTGCCTGGAGAGTTTCGAAAGTATGGAACCATGATTGCACCTGGTCTATATGCACCAGTTCATCAACACTTCTTCGTTGCTCGCATGGACATGTCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAAGTCAATATGAAAGTTGAGGAACCCGGTGAGAATAATGTTCACAATAATGCATTCTATGCTGAAGAGACTTTGCTCAGATCTGAACTGGAAGCCATGCGTGATTGTAATTCTTTGACTGCTCGACATTGGGTTGTAAGGAACACAAGAACGTGCAATAGAACTGGACAGTTGACAGGCTACAAGCTCGTACCTGGTTCAAATTGCTTACCATTGGCAGGCTCTGAGGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATATTTGGGTAACAACATATTCACGTGATGAGAAGTTTCCTGGAGGAGAATTTCCTAATCAAAATCCACGTGTTGGTGAAGGACTAGCAACGTGGGTTAAGCAGAACCGATCTTTGGAAGAAACTAACATAGTTCTTTGGTATGTATTTGGAATCACACACGTTCCTCGGTTGGAAGATTGGCCTGTTATGCCTGTAGAGCGCATTGGTTTTATGCTCATGCCTCATGGATTCTTCAACAGTTCTCCTGCAATAGATGTCCCACCTAATCCATGTGAAGCAGATTCCAAAGACAATGACATTAAGGATAACGGTTCTTCGAAGCCAATTCAGAATGGGTTAGCGGCAAAGCTTTAG	2292	0.4415	MASASQKATPPSPSSSSCCSPIPRVAAPPQEWSNTNKVRTVDSLPQPSTNAPLPKGVTAMPRAQSSHPLDPLSAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKNVVALADAYFFPPFQPSLLPRTKGGPVIPTKLPPRCARLVVYNKKSNETSVWIVELSQVHAVTRGGHHRGKVISSHVVPDVQPPMDAVEYAECEAIVKSFPPFIEAMKKRGIEDMDLVMVDPWCVGYYSEADAPGRRLAKPLIFCRSESDCPMENGYSRPVEGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTPGETRGGSDRSDVKPLQILQPDGPSFRVNGYYVEWQKWNFRVGFTPKEGLVIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALLPGEFRKYGTMIAPGLYAPVHQHFFVARMDMSVDSKPGEALNQVVEVNMKVEEPGENNVHNNAFYAEETLLRSELEAMRDCNSLTARHWVVRNTRTCNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNIWVTTYSRDEKFPGGEFPNQNPRVGEGLATWVKQNRSLEETNIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNSSPAIDVPPNPCEADSKDNDIKDNGSSKPIQNGLAAKL*	764

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr1g0774	763	MobiDBLite	consensus disorder prediction	732	763	-	-
	Apr1g0774	763	PANTHER	COPPER AMINE OXIDASE	1	756	IPR000269	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Apr1g0774	763	MobiDBLite	consensus disorder prediction	29	53	-	-
	Apr1g0774	763	Gene3D	-	197	299	-	-
	Apr1g0774	763	Pfam	Copper amine oxidase, N3 domain	192	295	IPR015802	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Apr1g0774	763	Pfam	Copper amine oxidase, enzyme domain	321	730	IPR015798	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Apr1g0774	763	Gene3D	Copper amine oxidase, catalytic domain	308	734	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Apr1g0774	763	MobiDBLite	consensus disorder prediction	1	69	-	-
	Apr1g0774	763	Pfam	Copper amine oxidase, N2 domain	67	165	IPR015800	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Apr1g0774	763	SUPERFAMILY	Amine oxidase N-terminal region	65	193	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Apr1g0774	763	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	18	-	-
	Apr1g0774	763	MobiDBLite	consensus disorder prediction	1	21	-	-
	Apr1g0774	763	Gene3D	-	54	194	-	-
	Apr1g0774	763	PANTHER	AMINE OXIDASE	1	756	-	-
	Apr1g0774	763	SUPERFAMILY	Amine oxidase N-terminal region	191	309	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Apr1g0774	763	SUPERFAMILY	Amine oxidase catalytic domain	315	734	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr1g0774	Apr-Chr1	9353423	9363722	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr1g0774	K00276		-	gmx:100798722	1425.22

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr1g0774	1	9353423	9363722	Apr1g0774	1	9353423	9363722	ECH
	Apr9g3139	9	38228405	38233510	Apr1g0774	1	9353423	9363722	PCT