Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3132 ATGATGGCAAAGCTTCCAACTATGTTTACCTTAAGGCACTTTCTTGTGCTGTCGTTGGCTCTGAACGTGAGCTTGATTCTGAGAATGGTGTATGAGAGTGAAGAAGGAGACAACAGTAAAGGGATGGAACCTAAGAGGGAAGGGCATGTTGCTCAAAAATCACGTTTATCCATATCCTCTACTTCTTATCTGGTTAATTCTACTCGCGCGGATCATGGTGGAGGAAGGGATAAAGTGATCGACCTGGACCATGGAGATCCTACAATGTATGAAAGATTTTGGCGACAAATGGGTGACAAGACTACAATCGTAATTCCAGGATGGCAATCCATGAGCTATTTTTCTGATGTGTCAAACATTTGCTGGTTTCTTGAGCCTGAGTTTGCGAAGGAGGTTGTAAGGTTGCACAATGTGGTGGGAAATGCTGTCACAGAAGGTCGCCATATTGTGGTAGGGACAGGTTCCTCTCAGCTAATTCTGGCTGCTCTTTTCGCTCTGTCTTCGCCTGACGCTGCTGAACCAATCAGCGTGGTATCTGCCGTACCCTATTACTCGTCCTACCCAGCATTGGCAAATTACCAAAAGTCTGGCCTATACAAATGGGCTGGGGATGCAGTGAGTTATGACAAAGATGGTCCATACATTGAGCTGGTTACTTCTCCCAATAACCCTGATGGATATACAAGGCGATCAGTGGTCAACCAAAGCCAGGGACTACTGATTCATGACCTTGCCTATTATTGGCCGCAATACACTCCAATATCATTCCCTTCAGATCATGATCTTACTCTTTTCACTGCCTCAAAAAGCACTGGTCATGCGGGAATGCGCATAGGGTGGGCTCTTGTGAAAGACAAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTAAATACAATTGGTGTCTCAAAGGATTCTCAACTGAGAGCTGCCAAGGTTTTAAAGGCAGTTTCAGATAGCTGCGAAGAAGAAAACTCCCAAGACGTGGAATCATTTTTCAAGTACAGCTACATGCACATGGAGCAAAGGTGGAAGCAACTGAGAGAAGTAGTTGGGGCCAGCGGTTTGTTCAGTTTGCCCCATTTTTCTCCTGCATTCTGCACCTTCTTTGGTAAGGAGATGGAGCCTCAACCAGCTTTCGTGTGGTTGAAGTGTGAGGGAGATATAGAAGACTGCGAAAGCTTCTTAAGGGGACACAAAATTGTAACAAGAGGAGGGAGAAACTTCGGGGCAAGCCCAAAATTCGTAAGAATTAGCATGCTGGATACAGATGAAACTTATGTACAGTTAATAGATAGACTATCCGCCATACAGCGAAAATAA 1326 0.4465 MMAKLPTMFTLRHFLVLSLALNVSLILRMVYESEEGDNSKGMEPKREGHVAQKSRLSISSTSYLVNSTRADHGGGRDKVIDLDHGDPTMYERFWRQMGDKTTIVIPGWQSMSYFSDVSNICWFLEPEFAKEVVRLHNVVGNAVTEGRHIVVGTGSSQLILAALFALSSPDAAEPISVVSAVPYYSSYPALANYQKSGLYKWAGDAVSYDKDGPYIELVTSPNNPDGYTRRSVVNQSQGLLIHDLAYYWPQYTPISFPSDHDLTLFTASKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLKAVSDSCEEENSQDVESFFKYSYMHMEQRWKQLREVVGASGLFSLPHFSPAFCTFFGKEMEPQPAFVWLKCEGDIEDCESFLRGHKIVTRGGRNFGASPKFVRISMLDTDETYVQLIDRLSAIQRK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3132 441 CDD AAT_like 126 435 - -
Apr9g3132 441 SUPERFAMILY PLP-dependent transferases 77 437 IPR015424 -
Apr9g3132 441 Gene3D - 125 328 IPR015421 GO:0003824
Apr9g3132 441 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 440 - -
Apr9g3132 441 Pfam Allinase 80 438 IPR006948 GO:0016846
Apr9g3132 441 Gene3D - 72 120 IPR037029 GO:0016846
Apr9g3132 441 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 2 440 - -
Apr9g3132 441 Gene3D Aspartate Aminotransferase, domain 1 330 439 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3132 Apr-Chr9 38162423 38169041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3132 K16903 - gmx:100777098 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3132 9 38162423 38169041 Apr9g3132 9 38162423 38169041 ECH
Apr9g3132 9 38162423 38169041 Apr1g0782 1 9573941 9581082 PCT