Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0782 ATGGCGAAGCTTCCTTCAGTGTTCTCTTTGAGGCACTGTTTGGTGTTATCTCTCGCCTTGAACGTGAGCTTGATACTGAGAATGATGTATGAAAGTGAAGAAAGGCACAACAACTCGTGTTTGGAAACACAAAGAGGAACCTCGATTGCAATTAGTTCTAACACGGAGGGGCACAATATCCACAAATCACGCGTTGTTATATCACCCACTTTGTCTTTGCCCAATTCTACTTGCACGGATCAAACAGGAGCCACCAATAGAGTCATCAACCTCGACCATGGAGACCCGACAGTGTACGAGAGATTTTGGAGACAAATGGGTGACAAGAGCACGATCATAATCCCGGGATGGCAATCGATGAGTTATTTTTCTGATGTAACCAACATTTGCTGGTTCTTGGAGGCAGAGTTTGCTAGGGAAGTGGTGAGGTTGCACAGAGTGGTGGGCAATGCAGTGACAGAAGGGCGTCACATTGTTGTTGGGACAGGTTCCTCTCAGCTCTTTCTTGCTGCTCTCTATGCTCTGTCCCCGCGTGATGCACCTGAACCAATCAGTGTCGTCTGTGCTTCACCCTATTACTCGTCATACCCATCAATGACAGATCACCTGAAATCAGGCCTATACAGATGGGCTGGGGATGCAGAAAGTTTTGAGAAAGATGGCCCCTACATTGAGTTGGTAACGTCTCCTAATAATCCTGATGGACATGTAAGACGGTCAAAAGTCAACCGAAGCCAAGGATTTTTGGTTCATGACCTTGCCTATTACTGGCCTCAGTACACTCCAATATCATCACCTGCAGACCATGATCTAACTCTTTTCACTGTCTCCAAAAGCACTGGCCATGCAGGAATGCGCATAGGGTGGGCTCTTGTAAAAGACCAAGAGGTAGCAAAGAAAATGACTAAATTCATTGAGCTCAACACAATAGGAGTGTCTAAGGATTCTCAACTCAGAGCAGCTAAGGTTTTAAGGGCAGTTTCTGATAGCTGGGAACAAGGAAACTCCCAAGAGGGTGAGTCATTCTTCAAGTTCAGCCACAAGCTCATGGCAAACAGGTGGAAGCAACTGAGACTTGTGATTGACCGTAGTGGATTGTTCAGTTTGCCCAAATTTTCACCTGCATTTTGCACCTTTTTCAATCAGGTGTTAGAGCCCCAACCAGCATTTGTATGGTTAAAATGTGAGGGAAAGGTGGAAGACTGCGAAAGCTTCCTACGAGCACACAACATCTTAACGAGAAGTGGAACGCACTTTGGAGTTAGCCCAAAATATGTAAGAATTAGCCTGTTGGATACTGACGAAAATTTTAACCAGCTTCTAGATAGACTCTCCGTCATACAGTCGCTATAG 1353 0.4545 MAKLPSVFSLRHCLVLSLALNVSLILRMMYESEERHNNSCLETQRGTSIAISSNTEGHNIHKSRVVISPTLSLPNSTCTDQTGATNRVINLDHGDPTVYERFWRQMGDKSTIIIPGWQSMSYFSDVTNICWFLEAEFAREVVRLHRVVGNAVTEGRHIVVGTGSSQLFLAALYALSPRDAPEPISVVCASPYYSSYPSMTDHLKSGLYRWAGDAESFEKDGPYIELVTSPNNPDGHVRRSKVNRSQGFLVHDLAYYWPQYTPISSPADHDLTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWEQGNSQEGESFFKFSHKLMANRWKQLRLVIDRSGLFSLPKFSPAFCTFFNQVLEPQPAFVWLKCEGKVEDCESFLRAHNILTRSGTHFGVSPKYVRISLLDTDENFNQLLDRLSVIQSL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0782 450 SUPERFAMILY PLP-dependent transferases 84 445 IPR015424 -
Apr1g0782 450 CDD AAT_like 136 444 - -
Apr1g0782 450 Gene3D - 73 129 IPR037029 GO:0016846
Apr1g0782 450 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 449 - -
Apr1g0782 450 Pfam Allinase 89 447 IPR006948 GO:0016846
Apr1g0782 450 Gene3D - 133 332 IPR015421 GO:0003824
Apr1g0782 450 Gene3D Aspartate Aminotransferase, domain 1 333 450 IPR015422 GO:0003824
Apr1g0782 450 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 3 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0782 Apr-Chr1 9573941 9581082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0782 K16903 - gmx:100807013 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0782 1 9573941 9581082 Apr1g0782 1 9573941 9581082 ECH
Apr9g3132 9 38162423 38169041 Apr1g0782 1 9573941 9581082 PCT