Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3131 ATGGCGCCAAGGCTAACCACCCTTGAAGAAAAAGCGCTTCTCCAAGCTGATTCACATTTTTCCATAAAACTCGAAGCCTCAACTTTCTTTGCCAATGACCATCCAATCCTCACTGAAGTCCCACCAAACATAACAACCGCCACTCCACCGCCCCACGATTCTTCAACCACCACCGTGGGTTGCTTCGTGGGGTTCAACGCGGACACGGCACGAAGCCGCCACGTGGTTCCAATCGGGAAGCTGAGGGGAATAAAATTCACGAGCATATTCCGTTTCAAACTATGGTGGAGCACTCATTGGTCAGGAACCAATGGGCGTGACGTGGAACACGAAACCCAAATGATGATTCTAGAGAACGATATAGACAAGGGACGCCCCTATGTCCTCCTCTTGCCACTCCTGGAAGGACCCTTCAGAGCCTCTCTCCAAGCAGGACTCCATGATGACGTGGACATTTGCATGGAGAGCGGGTCCACACGTGTCACCGAGTCCACCTTCAGAAGCTCCTTGTACATTCACGTGCACCATGATCCCTTTAGTTTAATGAACGAAGCAATGAAAGTGATGCGAGTCCATCTTGGATCGTTCAAGCTTCTAGAAGAAAAAACCCCACCGGGTATTGTGGACAAGTTGGGGTGGTGCACTTGGGATGCGTTTTACCTCAAGGTGCACCCTCAAGGAGTGTGGGAAGGTGTGAAGGGCCTTGTGCAAGGTGGATGCCCTCCGGGTTTTGTAATCATCGATGATGGTTGGCAAACTTTTTGTCGTGATGATGAACCCGTTACGGACCAAGGAAGCTTGAATTGTTCCATTCCTGGGGAGCAAATGCTAAATAGGCTTATAAAATTTGAAGAAAATTGTAAGTTTAGGGAGTATCGGTCTCGTAGGGTGCCCTATGATGGAGGGATGGGTGCCTTTGTGAGGGACCTTAAAGAGGAGTTTAAGGCCTTGGAGTATGTGTATGTGTGGCATGCGCTTTGTGGGTATTGGGGTGGGCTTAGGCCCAACGTTGTAGGGATGCCTGAGTCGAAGGTGGTTGCTACTAAGTTGTCTGAAGGGGTTGAGATGACTATGAGGGATTTGGCGGTGGTGAAGATAGTGGAGAATGGGGTCGGGTTGGTGGCACCGCAAGAGGCGCACTTGTTGTATGAGGGTCTCCATTCTCATCTCGAATCTGTGGGAATTGACGGTGTCAAGATTGATGTCACACATGTTCTAGAGATGCTATCGGAGGACTACGGTGGTCGTGTTGAACTCGCCAAAGCATATCACAAAGCACTCACTGCTTCCGTGAGGAAGCATTTCAAAGGCAATGGTGTCATTGCTAGCATGCAGCAGTGCAATGACTTCATGTTCCTTGGTACAGAAACCATATCCCTTGGACGCGTTGGTGATGATTTTTGGTGTACGGATCCTGCTGGAGATCCAAACGGTACGTATTGGCTACAAGGATGTCACATGGTGCACTGTGCTTACAACAGTTTGTGGATGGGAAATTTTATACACCCAGATTGGGACATGTTCCAATCAGATCATGCTTGTGCTGAATTCCATGCTGCTTCTCGTGCCATCTCTGGTGGACCAGTTTATGTAAGCGATTCTGTTGGAAACCACAACTTCAAGTTGCTTAAGAAGCTTGTTCTACCTGATGGCTCCATTTTGCGTTGTCAACATTATGCACTTCCCACCCGAGACTGCTTATTCGTTGACCCTTTACATGACGGCAAAACAATGCTGAAAATTTGGAACCTTAATAAATATTCCGGGGTTTTGGGTCTGTTCAATTGCCAAGGAGGAGGGTGGTGCCCTATTACCAGGAGAAACAAGAGTGCCTCTGACTATTCACACTCTGTGACTTGCTCTGCAAGTCCTAAAGACATTGAATGGAGCAAAGGGAACCACCCAATCTGCATCAAAGGGGTAGAAGTATTTGCTGTGTACATGTTTAAGGATGATAAGTTGAAGCTGATGAAGTATGCAGAGAGTGTTGAGGTTTCACTTGAGCCTTTTAGTTTTGAGCTTTTGACAGTTTCTCCCGTGGTTGTCTTACCCACAAAATCAATCCAATTTGCTCCAATTGGGTTGGTAAATATGCTTAACTCTGGGGGCTCAATTCTGTCGACAGAATTTGATAAACAGGAAATTTTGACAAGGATTGAGGTAAGAGGGCATGGGGAAATGAGGGTATTTGCATCAGAGAAGCCGGTAAGTTGTAAGATTGATGGAGAACCTGTGGAATTTTATTATGTTGATAGCATGGTGAGGCTCCAAGTGTCATGGCCTGGCTCTTCAAGATTGTCTGTGGTCGAGTATTTGTTCTGA 2322 0.472 MAPRLTTLEEKALLQADSHFSIKLEASTFFANDHPILTEVPPNITTATPPPHDSSTTTVGCFVGFNADTARSRHVVPIGKLRGIKFTSIFRFKLWWSTHWSGTNGRDVEHETQMMILENDIDKGRPYVLLLPLLEGPFRASLQAGLHDDVDICMESGSTRVTESTFRSSLYIHVHHDPFSLMNEAMKVMRVHLGSFKLLEEKTPPGIVDKLGWCTWDAFYLKVHPQGVWEGVKGLVQGGCPPGFVIIDDGWQTFCRDDEPVTDQGSLNCSIPGEQMLNRLIKFEENCKFREYRSRRVPYDGGMGAFVRDLKEEFKALEYVYVWHALCGYWGGLRPNVVGMPESKVVATKLSEGVEMTMRDLAVVKIVENGVGLVAPQEAHLLYEGLHSHLESVGIDGVKIDVTHVLEMLSEDYGGRVELAKAYHKALTASVRKHFKGNGVIASMQQCNDFMFLGTETISLGRVGDDFWCTDPAGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSDHACAEFHAASRAISGGPVYVSDSVGNHNFKLLKKLVLPDGSILRCQHYALPTRDCLFVDPLHDGKTMLKIWNLNKYSGVLGLFNCQGGGWCPITRRNKSASDYSHSVTCSASPKDIEWSKGNHPICIKGVEVFAVYMFKDDKLKLMKYAESVEVSLEPFSFELLTVSPVVVLPTKSIQFAPIGLVNMLNSGGSILSTEFDKQEILTRIEVRGHGEMRVFASEKPVSCKIDGEPVEFYYVDSMVRLQVSWPGSSRLSVVEYLF* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3131 773 Pfam Raffinose synthase or seed imbibition protein Sip1 25 757 IPR008811 -
Apr9g3131 773 PANTHER - 1 773 IPR008811 -
Apr9g3131 773 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE-RELATED 1 773 - -
Apr9g3131 773 Gene3D Aldolase class I 208 546 IPR013785 -
Apr9g3131 773 SUPERFAMILY (Trans)glycosidases 205 556 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3131 Apr-Chr9 38145583 38149028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3131 1 773 Glycoside Hydrolase AT5G40390 60.837 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3131 K06617 - gmx:100798883 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0785 1 9615846 9620483 Apr9g3131 9 38145583 38149028 ECH
Apr9g3131 9 38145583 38149028 Apr9g3131 9 38145583 38149028 ECH