Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0785 ATGGCTCCGAGCTTAAGCAAAAATGCGACCATAGACGCATTGGATCTGGTCGAGGGCAATTTACGCTTGTCCGTAACCTTAAAAGGATCAAACTTTCTTGCTAATGGCCACCCGTTTCTCACCCAAGTCCCAGCTAACATAAGAGCCACTCTCGATGCTAAGAACCCCGCGGGTTGCTTCGTGGGATTCGACGCTGACGAGCCCAAAAGTAGACACATGGCATCCATAGGGAAACTCATAGGCATAAGGTTCATGAGCCTATTCAGGTTCAAGGTGTGGTGGACCACTCACTGGGTGGGAAGCAACGGACACGAGGTGGAGCACGAAACCCAATTGATGCTACTCGACAAAAACGACTCCTTGGGACGCCCCTACGTTTTGCTACTGCCAATACTCGAAGGCTCCTTCCGAGCCTGTCTCCAACCCGGTTCGGATGACTACGTGGACGTGTGTGTGGAGAGCGGTTCGACACGTGTCAGTGGGTCCAGCTTCAGGAGCTGTTTGTACATACACGTTGGCGATGACCCTTACCGGTTGGTTAAAGAGGCTATGAAAGTGGTTAGAATCCACTTAGGGACTTTCAAGCTTCTGGAGGAGAAAAACCCACCCAATATTGTAGACAAGTTTGGTTGGTGCACGTGGGATGCATTTTACTTGAAGGTGAATCCCAAAGGGGTGTGGGAAGGGGTGAAGGGTCTGGTGGAGGGTGGGTGCCCCCCAGGGTTGGTCCTCATCGATGATGGGTGGCAATCCATCTGTCACGACGAGGACCCAATCACGGACCAAGAGGGTATGAACCGAACCTCTGCGGGGGAGCAAATGCCGTGTAGGCTCATCAAGTTTGAGGAAAATTACAAATTTAGGGAGTATTGTGGTGGAAAGGACTCTAAGAAGGGTATGGGTGCGTTTGTCAGGGATTTGAAGGAGCAGTTTAGGAGCGTGGAGAATGTGTATGTTTGGCACGCGCTTTGTGGTTATTGAGGTGGGATCAGGCCTAAAGTGCAGGGCATGCCCGAGGCTAAGGTTGTTGCTCCGAAGCTGTCGCAGGGGCTGAAGATGACAATGGAGGATTTGGCTGTGGATAAAATCGTGAACAACGGTGTGGGTTTGGTGCCACCTCACCTTGCTCATCTATTGTACCAGGGGCTTCACTCGCATTTGGAATCCGCGGGAATTGATGGTGTCAAGGTTGACGTTATACATTTGCTTGAAATGCTATCAGAGGAATATGATGGCCGTGTTGAGCTGGCCAAAGCTTATTACAAAGCACTCACCGCTTCGGTGAAGAAGCATTTCAAAGGCAACGGCGTAATTGCCAGCATGGAGCATTGCAATGACTTCTTTCTCCTTGGCACAGAAGCCATATCCCTTGGGCGCGTAGGAGATGATTTTTGGTGCACTGATCCTTCTGGAGACCCGAACGGTACATATTGGCTCCAAGGATGTCACATGGTGCACTGTGCCTACAACAGTTTGTGGATGGGGAATTTTATTCAACCAGATTGGGACATGTTCCAGTCCACTCATCCTTGTGCCGAATTCCACGCCGCTTCTAGGGCCATTTCTGGGGGACCCGTTTACGTTAGCGATTGCGTGGGAAAGCACAACTTCAACTTGCTCAAGAGCCTCGTTTTGCCTGATGGCTCCATTTTGCGTTGTCAACAATATGCACTTCCTACTCGAGACTGCTTATTTGAAGACCCATTACATGACGGCAAAACAATGCTCAAAATTTGGAACCTCAATAAATATACAGGTGTTTTGGGTCTATTTAATTGCCAAGGAGGTGGGTGGTGCCGTGTGACTAGGCGAAACAAGTGTGCCTCTGAATTTTCACACACCGTGACATGCTTTGCGAGTCCTAAAGATATTGAATGGAAGAACGGGAAACGGCCAATGTGCATCAAAGGGGTGGATGTATTTGCTGTGTATTTGTTCAAAGCTAACGAGCTGAAGCTCATGAAGTCATCAGACGAATTAGAAATTTCACTCGAGCCATTTAGTTTTGAGTTATTTACAGTGTCTCCAGTGATAATGTTATCAAAAAGGTTAATTCAATTTGCTCCAATTGGATTAGTGAACATGCTTAATTCTGGTGGTGCCATTCAGTCCTTGCAATTTGACGACCACACAAATCTAGTCAAAATTAGGGTAAGGGGTTGTGGGCAGATGAGGGTGTTCGCTTCAGAGAAGCCAGTAAGTTGCAAAATAGATGGGGTAGTCGTGAAATTTGATTATGAGGACAAGATGGTGAGAGTCCAAGTTCCCTGGCCTAGTTCTTCAAAATTGTCAATGGTTGAATTTCTGTTTTGA 2313 0.4799 MAPSLSKNATIDALDLVEGNLRLSVTLKGSNFLANGHPFLTQVPANIRATLDAKNPAGCFVGFDADEPKSRHMASIGKLIGIRFMSLFRFKVWWTTHWVGSNGHEVEHETQLMLLDKNDSLGRPYVLLLPILEGSFRACLQPGSDDYVDVCVESGSTRVSGSSFRSCLYIHVGDDPYRLVKEAMKVVRIHLGTFKLLEEKNPPNIVDKFGWCTWDAFYLKVNPKGVWEGVKGLVEGGCPPGLVLIDDGWQSICHDEDPITDQEGMNRTSAGEQMPCRLIKFEENYKFREYCGGKDSKKGMGAFVRDLKEQFRSVENVYVWHALCGY*GGIRPKVQGMPEAKVVAPKLSQGLKMTMEDLAVDKIVNNGVGLVPPHLAHLLYQGLHSHLESAGIDGVKVDVIHLLEMLSEEYDGRVELAKAYYKALTASVKKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCTDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPVYVSDCVGKHNFNLLKSLVLPDGSILRCQQYALPTRDCLFEDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCRVTRRNKCASEFSHTVTCFASPKDIEWKNGKRPMCIKGVDVFAVYLFKANELKLMKSSDELEISLEPFSFELFTVSPVIMLSKRLIQFAPIGLVNMLNSGGAIQSLQFDDHTNLVKIRVRGCGQMRVFASEKPVSCKIDGVVVKFDYEDKMVRVQVPWPSSSKLSMVEFLF* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0785 769 Gene3D Aldolase class I 207 542 IPR013785 -
Apr1g0785 769 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED 1 769 - -
Apr1g0785 769 SUPERFAMILY (Trans)glycosidases 202 554 IPR017853 -
Apr1g0785 769 PANTHER - 1 769 IPR008811 -
Apr1g0785 769 Pfam Raffinose synthase or seed imbibition protein Sip1 30 752 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0785 Apr-Chr1 9615846 9620483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0785 2 769 Glycoside Hydrolase AT5G40390 65.992 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0785 K06617 - gmx:100800308 1393.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0785 1 9615846 9620483 Apr9g3131 9 38145583 38149028 ECH
Apr1g0785 1 9615846 9620483 Apr1g0785 1 9615846 9620483 ECH