Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3126 ATGGACATGAAGGGATATTCAGTTTCCTGGACAAAACATAAGAAAGAGCCATATTTTGCAGCTAATCACAGAAGAAGACAACACCAATGCATACAAGAAAATCATCATTCCCCAGAAGAAACAAGTTCACTAAATCATTCCCTGAAATTGGCTGCTTCTACTTCCCAAAATACTCTACCTATGTTACCTGTCTTTGTTGCTTTGCTGCTACTTGTTTCTTCAATTAGCCCAGCATTTTCTCACCCCATTGCTTCCAATTCTCCTTTACCACTGCCGTCTCAACTCAATGCTAACCACACTGTGAGATTGAGACCAGGTGCAGTGTTGCAAAAGCTGAGGAGAATCAGAACTCACCTCAAGAAGATCAACAAGCCCGCTGTTAAAACAATTAAGAGTCCAGATGGTGATTTGATAGATTGTGTTTTATCTCATCAGCAACCTGCTTTTGACCATCCTCAGCTCAAAGGGCAAAGACCATTGGATCCACCAGAAAGGCCTAAGGGCCACTCCAATGAAGAAACAGTAATAGAGAGCTTTCAGCTTTGGACTGATTCTGGTGAAGCATGTCCAGAAGGAACTGTTCCAATCAGAAGAACAACAGAAGAAGATATTCTTAGAGCAAGCTCCATCAGAGGATTTGGAAGAAAACCAAGACATGTACGGAGGGACTCAACAGGCACTGGTCATGAGCATGCAGTTGTATTTGTAAATGGAGATCAATACTATGGAGCAAAAGCAAGCATAAACGTGTGGACACCAAGCGTAACCGATCCATATGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGATCGTTTGGTAATGATCTGAATACCATAGAAGCTGGATGGCAGGTAAGCCCTGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACGGACGCATATCAAGCTACTGGATGCTACAACTTGTTATGTTCAGGATTTATCCAAACAAACAACAGGATAGCAATAGGGGCTGCAATCTCCCCAAGATCCATCTATAATGGAAGGCAATTTGATATTGGCTTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTAGAGTTTGGGTCAGGGCTACTTGTTGGGTACTGGCCAGCAAACTTGTTTAGTCATTTGAGAAACCATGCAAGCATGTTACAATTTGGAGGAGAAATTGTGAATTCTCGTTCAAGGGGCTACCACACTGGCACTCAAATGGGTAGTGGCCATTTTGCTGAAGAAGGCTTTAGAAAAGCAGCATATTTTAGAAACTTACAAGTTGTTGATTGGGACAATAACTTGCTTCCTCTTGCAAATATCCACCAATTGGCTGATCATTCCAATTGCTATGACATAAGGATGGGATCAAACAATGTCTGGGGAACTTACTTTTATTATGGAGGTCCTGGAAGGAATGTGAGATGTCCATGA 1434 0.4205 MDMKGYSVSWTKHKKEPYFAANHRRRQHQCIQENHHSPEETSSLNHSLKLAASTSQNTLPMLPVFVALLLLVSSISPAFSHPIASNSPLPLPSQLNANHTVRLRPGAVLQKLRRIRTHLKKINKPAVKTIKSPDGDLIDCVLSHQQPAFDHPQLKGQRPLDPPERPKGHSNEETVIESFQLWTDSGEACPEGTVPIRRTTEEDILRASSIRGFGRKPRHVRRDSTGTGHEHAVVFVNGDQYYGAKASINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFIQTNNRIAIGAAISPRSIYNGRQFDIGLMVWKDPKHGHWWLEFGSGLLVGYWPANLFSHLRNHASMLQFGGEIVNSRSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNNLLPLANIHQLADHSNCYDIRMGSNNVWGTYFYYGGPGRNVRCP* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3126 477 PANTHER CARBOXYL-TERMINAL PEPTIDASE 41 477 - -
Apr9g3126 477 Pfam Neprosin activation peptide 129 234 IPR025521 -
Apr9g3126 477 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 41 477 - -
Apr9g3126 477 Gene3D - 254 364 - -
Apr9g3126 477 MobiDBLite consensus disorder prediction 148 172 - -
Apr9g3126 477 MobiDBLite consensus disorder prediction 157 172 - -
Apr9g3126 477 Pfam Neprosin 260 470 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3126 Apr-Chr9 38065460 38069023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3126 - - gmx:100782442 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0790 1 9710881 9714685 Apr9g3126 9 38065460 38069023 ECH
Apr9g3126 9 38065460 38069023 Apr9g3126 9 38065460 38069023 ECH
Apr9g3126 9 38065460 38069023 Apr1g0790 1 9710881 9714685 PCT