Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0790 ATGGCCAATGAAAGATATTCAAGTTCCAGGGAGAAAAATAGCAATGATCCATTTTTGGCATCTCACCACACAAGAAGACAACATCACCAATGTGTAAAACCAAACAATCATGTCTACCCACAACAAACATTTGCACAAAACCATCCTCTGAAAATGGCTACTTTCACTCCACCTATTTTTGTTGCTTTGCTGCTCCTTCTTACCTCAATTATTACCCCAGCATTGTGTCATCCCTTGAAGGGTAACCACACTTTAAGAGCAGCTCAAGAATTGCACAAGTTGAGGAGAATCAGAATTCACTTGCAGAAGATCAACAAGGCTCCTGTCAAGACAATTCAGAGTCCAGACGGTGATTTGATAGATTGTGTTTTATCTCACAAACAACCAGCTTTTGACCATCCAAAGCTAAGAGGGCATAAACCATTGGATCCACCACGGAGGCCAAAGGGAAACTACACTAATGGTGAAAAAGTAAGTGAGAGCTTTCAGCTATGGAGTGATTCTGGTGAAGCATGCCCAGAAGGAACTATTCCAATTAGAAGAACAACAGAAGAGGATATTCTTAGAGCAACCTCTATCCGAACATTTGGAAGAAAACCAAGAAATGTACGGAGAGACTCATCTGGCACTAATCATGAGCATGCAGTTGTTTTTGTAAATGGTGATCAATACTATGGAGCAAGGGCAAGCATAAATGTGTGGTCACCCCGTGTAACCGATCAATATGAATTCAGCTTGTCACAGATATGGGTTATTGCTGGCTCCTTTGGTCATGATCTCAACACCATAGAAGCTGGTTGGCAGGTAAGTCCAGAACTGTATGGGGACAGTTATCCAAGGTTCTTCACTTATTGGACAACCGATGCATATCAAACAACTGGGTGCTACAACTTACTCTGTTCAGGCTTTATCCAAACTAACAATAGAATAGCAATTGGGGCAGCAATCTCCCCAAGATCTGCTTATAACAGTAGACAGTTTGACATTGGCTTAATGGTTTGGAAGGATCCAAAACATGGACATTGGTGGCTAGAGTTTGGGTCAGGACTAGTAGTTGGGTACTGGCCAGCGAACATGTTTAGTCACTTGAGGAGTCATGCAAGCATGGTACAATTTGGAGGAGAAATTGTGAATACTCGTTCAAGGGGTTACCACACAGGCACTCAAATGGGTAGTGGCCATTTTGCTGAAGAAGGATTTAGAAAAGCAGCATATTTTAGAAACTTACAAGTGGTTGATTGGGACAATAGTTTGCTTCCTCTTAGAAATATTCACCATTTCGCTGACCATTCCAATTGTTATAACATATGGCAGGGAAGCAACAATGTTTGGGGAACTTACTTTTATTATGGAGGACCTGGAAGGAGTGTGAGATGCCCATGA 1383 0.4179 MANERYSSSREKNSNDPFLASHHTRRQHHQCVKPNNHVYPQQTFAQNHPLKMATFTPPIFVALLLLLTSIITPALCHPLKGNHTLRAAQELHKLRRIRIHLQKINKAPVKTIQSPDGDLIDCVLSHKQPAFDHPKLRGHKPLDPPRRPKGNYTNGEKVSESFQLWSDSGEACPEGTIPIRRTTEEDILRATSIRTFGRKPRNVRRDSSGTNHEHAVVFVNGDQYYGARASINVWSPRVTDQYEFSLSQIWVIAGSFGHDLNTIEAGWQVSPELYGDSYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNRIAIGAAISPRSAYNSRQFDIGLMVWKDPKHGHWWLEFGSGLVVGYWPANMFSHLRSHASMVQFGGEIVNTRSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNSLLPLRNIHHFADHSNCYNIWQGSNNVWGTYFYYGGPGRSVRCP* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0790 460 Gene3D - 234 346 - -
Apr1g0790 460 MobiDBLite consensus disorder prediction 1 30 - -
Apr1g0790 460 Pfam Neprosin activation peptide 111 217 IPR025521 -
Apr1g0790 460 MobiDBLite consensus disorder prediction 1 15 - -
Apr1g0790 460 PANTHER CARBOXYL-TERMINAL PEPTIDASE 43 460 - -
Apr1g0790 460 Pfam Neprosin 242 453 IPR004314 -
Apr1g0790 460 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 43 460 - -
Apr1g0790 460 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0790 Apr-Chr1 9710881 9714685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0790 - - gmx:100777828 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0790 1 9710881 9714685 Apr9g3126 9 38065460 38069023 ECH
Apr1g0790 1 9710881 9714685 Apr1g0790 1 9710881 9714685 ECH
Apr9g3126 9 38065460 38069023 Apr1g0790 1 9710881 9714685 PCT