Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3120 ATGAAACTTAGACATTCTGCGATGGGTTCCATTTGGATGTGTCATTTCTTTATGTTATTGGCCATATTGAATGTTGCTTTTGTTTCAACTATGGCCAATAATGCAACAGACTCCTACTGGCTTCTCAGGATTAAATCAGAACTGGTTGATCCGTCAGGAGTCATCAAAAACTGGTCACCAACAACTCATATATGCAGCTGGAATGGAATAACATGTGAAGTTGATCAAAATCACATTTTAGGCCTGAATCTATCAGGTTCAGGAATATCAGGTTCCATTTCAGTTGAGTTCAGTCACCTCATTTATCTTCAAACACTTGATTTGTCTTCAAATTCCCTTTCTGGCTCCATACCTTCAGAGTTTGGTCAGCTTCAAAATCTAAGAATACTTCATCTATACTCAAATTATCTCTCTGGAAATATTCCTGCAGAGATAGGTTACATGAGGATGTTGCAAGTTCTTAGAATAGGGGACAACATGTTGACAGGTGAAATTCCACCTAGTATCACCAACTTGATTGAGTTGACAGTGTTGGGTCTAGGCTACTGCCACTTAAATGGAAGCATACCCTTTGGAATTGGCAAATTGAAGAATCTAATATCCCTTGATTTACAAATGAACAGCCTTAGTGGACCCATACCAGAAGAGATTCAAGGCTGTGAAGAGCTCCAAAATTTTGCAGCATCAAACAACATGCTTGAAACAGATATACCTTCCTCTATGGGGTCTCTTAAATCATTGAAAATTCTGAATCTGGCCAATAACAGTTTATCTGGATCCATTCCTAAAGCCTTGAGTCATCTTTCAAACTTAACATACCTGAATTTGCTTGGAAACAAACTAAATGGTGAAATTCCTTCCGAGCTTAATAGTCTGATTCAGTTGCAGAAGCTAGACTTGTCTGGAAACAACCTTTCTGGATCAATACCACTCCTTAATGTAAAATTGAAGAGTCTTGAAACTCTTGTTCTTTCTGATAATGCTTTGACTGGTAGCATTCCAAGTAACTTCTGCTTCAGAGGTTCAAAGCTTCAGCAACTTTTCCTGGCTCGAAACATGCTCTCCGGCAAATTTCCTTTGGAGTTACTCAACTGTTCCTCAATCCAACAGTTGGACCTTTCTGATAACAGCTTTGAAGGAGAGCTTCCATCAAGCCTGGACAAATTACAGAACCTCATAGATCTTGTACTCAACAACAATAGCTATGTTGGATCTCTACCTCCGCAAATTGGAAATATTAGTAGCTTGGAAGGTCTTTTCCTATTTGGTAACTTTTTCACAGGTAAAATTCCAGTGGAGATTGGAAGGTTGAAGAGATTGAACACCATTTACCTCTATGATAACCAGATGTCAGGACTTATACCAAGAGAGTTGACAAACTGCACAAGCTTAATGGAAATTGACTTCTTTGGAAATCACTTTACAGGCCCCATTCCAGAGACAATTGGTAAGCTCAAGGACTTGGTTGTTCTTCATTTGAGGCAGAATGACTTGTCAGGTCCAATCCCACCAAGCATGGGGTACTGTAAAAGTCTTCAGATATTAGCCTTAGCAGATAACAGGTTGTCTGGTTCTGTTCCACCCACGTTCAGTTACCTTTCAGAACTTAGTAAAATTACCCTTTACAACAACTCATTTGAAGGACCTCTCCCTCATTCACTATCTTCTCTAAAAAGTCTCAAAATCATAAATTTTTCACACAACAAGTTCAGTGGAAGTTTCTTTCCTCTCACAGGTTCAAATTCTCTGACTCTTCTGGACTTGACCAACAACAGCTTCTCAGGCCCCATCCCTTCTACTCTAACCAATTCTAGAAATCTCAGCCGTCTCAGACTTGGACACAACTATCTCACAGGAAGCATTCCTTCTGAATTTGGTCACTTTACTGAGCTCAACTTTCTTGATTTATCATTCAACAATTTAACAGGAGATGTACCACCTCAACTCTCAAACTCAAGAAAAATGGAACACTTCCTGCTGAGCAATAACAGATTGAATGGCCAAATACCTCCTTGGTTGGGAAGCTTACAAGAACTTGGTGAGCTTGATCTCTCATACAATAACTTCAGTGGGAAGTTACCTTCTGAGCTTGGTAACTGCTCAAAATTACTCAAGCTTTCTCTCCATCACAACAATCTCTCTGGTGAAATCCCGCAAGAGATTGGAAACCTCACTTCTCTCAATGTCTTCAATTTGCAAAGGAATAGTCTCTCTGGCCTCATTCCTCCGACAATTCAGCAATGCACAAAACTTTATGAGCTCAGGCTCTCAGAAAACTTCTTCACAGGTAACATCCCAGTTGAGCTAGGAGGGCTTGCTGAGTTGCAAGTCATATTGGATTTGAGTAAAAATCTCTTCTCTGGTGACATTCCACCATCTCTAGGAAACCTCATGAAGCTAGAAAGACTCAATCTTTCTTTCAATCAACTTGAAGGAAAATTTCCTCCTTCACTTGGTAAACTCACTAGTCTGCACGTGCTGAATCTCTCAAACAACCATCTTGAAGGCCAGGTTCCTTCAATCTTTTCAGGATTCCCACTAACCTCATTCCTGAACAATAGGGGCTTGTGTGGCCCACCATTAGTATCATGCTCAGAATCCGAAGCACAGGGGAAAATGCAGCTATCAAACACACAAGTGACAGCAATCATTGTGGCCATTGTTTTTACTTCCACTGTGATATGCTTAATTATGCTGTATATAATGCTCAGAATCTGGTGCAACTGGAGAAAAGTGGCCATTTCAAGTGCAGATGGTGGCATTGTTGGTCAAAAGAGAGAGGAGGGTAGATGGGTATGTGTTGATCAGAAGACAAGGAATGGAGAGTATTGGAATATGAATTCCTTTGGGTTGATTCCTTCACCAGATAAACAGAATTCAGCAACAACAACTTGCTTCTATAATCTCAAAATGGAAACCATGGAAAATACAAATATATAA 2940 0.3993 MKLRHSAMGSIWMCHFFMLLAILNVAFVSTMANNATDSYWLLRIKSELVDPSGVIKNWSPTTHICSWNGITCEVDQNHILGLNLSGSGISGSISVEFSHLIYLQTLDLSSNSLSGSIPSEFGQLQNLRILHLYSNYLSGNIPAEIGYMRMLQVLRIGDNMLTGEIPPSITNLIELTVLGLGYCHLNGSIPFGIGKLKNLISLDLQMNSLSGPIPEEIQGCEELQNFAASNNMLETDIPSSMGSLKSLKILNLANNSLSGSIPKALSHLSNLTYLNLLGNKLNGEIPSELNSLIQLQKLDLSGNNLSGSIPLLNVKLKSLETLVLSDNALTGSIPSNFCFRGSKLQQLFLARNMLSGKFPLELLNCSSIQQLDLSDNSFEGELPSSLDKLQNLIDLVLNNNSYVGSLPPQIGNISSLEGLFLFGNFFTGKIPVEIGRLKRLNTIYLYDNQMSGLIPRELTNCTSLMEIDFFGNHFTGPIPETIGKLKDLVVLHLRQNDLSGPIPPSMGYCKSLQILALADNRLSGSVPPTFSYLSELSKITLYNNSFEGPLPHSLSSLKSLKIINFSHNKFSGSFFPLTGSNSLTLLDLTNNSFSGPIPSTLTNSRNLSRLRLGHNYLTGSIPSEFGHFTELNFLDLSFNNLTGDVPPQLSNSRKMEHFLLSNNRLNGQIPPWLGSLQELGELDLSYNNFSGKLPSELGNCSKLLKLSLHHNNLSGEIPQEIGNLTSLNVFNLQRNSLSGLIPPTIQQCTKLYELRLSENFFTGNIPVELGGLAELQVILDLSKNLFSGDIPPSLGNLMKLERLNLSFNQLEGKFPPSLGKLTSLHVLNLSNNHLEGQVPSIFSGFPLTSFLNNRGLCGPPLVSCSESEAQGKMQLSNTQVTAIIVAIVFTSTVICLIMLYIMLRIWCNWRKVAISSADGGIVGQKREEGRWVCVDQKTRNGEYWNMNSFGLIPSPDKQNSATTTCFYNLKMETMENTNI* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3120 979 SUPERFAMILY RNI-like 580 846 - -
Apr9g3120 979 Gene3D Ribonuclease Inhibitor 149 223 IPR032675 -
Apr9g3120 979 Gene3D Ribonuclease Inhibitor 37 148 IPR032675 -
Apr9g3120 979 Pfam Leucine rich repeat N-terminal domain 36 72 IPR013210 -
Apr9g3120 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 451 644 - -
Apr9g3120 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 455 - -
Apr9g3120 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 642 973 - -
Apr9g3120 979 SUPERFAMILY L domain-like 340 644 - -
Apr9g3120 979 Pfam Leucine rich repeat 582 641 IPR001611 GO:0005515
Apr9g3120 979 Pfam Leucine rich repeat 230 281 IPR001611 GO:0005515
Apr9g3120 979 Pfam Leucine rich repeat 511 570 IPR001611 GO:0005515
Apr9g3120 979 Gene3D Ribonuclease Inhibitor 481 577 IPR032675 -
Apr9g3120 979 Gene3D Ribonuclease Inhibitor 224 381 IPR032675 -
Apr9g3120 979 Gene3D Ribonuclease Inhibitor 578 873 IPR032675 -
Apr9g3120 979 SMART LRR_typ_2 244 267 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 676 700 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 316 341 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 485 509 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 268 292 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 724 747 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 196 219 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 628 652 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 821 844 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 100 123 IPR003591 -
Apr9g3120 979 SMART LRR_typ_2 124 148 IPR003591 -
Apr9g3120 979 ProSiteProfiles Leucine-rich repeat profile. 294 316 IPR001611 GO:0005515
Apr9g3120 979 Pfam Leucine Rich repeats (2 copies) 294 333 IPR025875 -
Apr9g3120 979 PRINTS Leucine-rich repeat signature 295 308 - -
Apr9g3120 979 PRINTS Leucine-rich repeat signature 821 834 - -
Apr9g3120 979 Pfam Leucine Rich Repeat 103 123 IPR001611 GO:0005515
Apr9g3120 979 Pfam Leucine Rich Repeat 799 821 IPR001611 GO:0005515
Apr9g3120 979 Gene3D Ribonuclease Inhibitor 382 480 IPR032675 -
Apr9g3120 979 SUPERFAMILY L domain-like 60 378 - -
Apr9g3120 979 PANTHER - 642 973 - -
Apr9g3120 979 PANTHER - 8 455 - -
Apr9g3120 979 PANTHER - 451 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3120 Apr-Chr9 38008425 38012006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3120 233 886 Receptor kinase-like Gene Family AT5G46330 33.151 2.33e-99 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3120 - - gmx:100818792 1634.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3120 9 38008425 38012006 Apr1g0794 1 9773554 9776439 PCT