Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0794 ATGGATTCCATTTGCATGTGCCATTTTATTCTGTTATTGACCATAGTGTGTACTTTTGTTGTTGCAACTCTAGGAGACAATACAACAGATTCCTACTGGCTTCTAAGAATTAAATCAGAATTGGTCAATCCATTTGGAGCCATGAGCAACTGGTCTCCAACAACTCATATTTGTAGCTGGAATGGACTGACATGTGCAAATGATCAGACACATATTATAGGCCTTAATTTGTCTGGTTCAGGAATATCAGGTTCCATTTCAGTTGAGTTTAGTTACCTCATTTCTCTTCAAACACTTGATTTGTCTTCAAATTCCATCACAGGTTCCATCCCTTCTGAAATTGGACAGCTTCAAAATCTAAGAATATTGCTACTGTACTCAAATTATCTCTCTGGTAACATTCCTGCAGAGATAGGTAATTTGAACAAGTTGCAAGTTCTTAGATTAGGAGACAACATGTTGACAGGTGAAATCACACCTAGTATTGGCAACTTGGGTGAGTTGACAGTGTTAGGTCTTGCAAATTGCAACTTGAATGGAAGCATACCTGTGGAGATGGGTAACTTGAAGCATCTAACATCTCTTGATTTACAAGTGAACAGTATCAGTGGCCTCATACCTGAAGAGATTCAAGGTTGTGAAGAGCTCCAAAATTTTGCCGCATCAAACAACATGCTTGAAGGAGAGATACCCTTCTCTATTGGATCTCTCAGATCATTAAGAATTCTAAACCTGGCCAATAATAGTCTTTCTGGATCAATTCCTACTTCTTTGAGTGATCTATCCAACTTGACATACCTGAATTTGCTTGGAAATAAATTAAATGGTGAAATTCCTTCAGATATTAACAATTTGAGCCAGTTACAGAAGCTTGACATGTCCAAAAACAACCTTTCTGGGTCACTGACCCTCCTTAATACCAAATTACTCAATCTTGAAACTCTAGTTCTGTCTGATAATGCTTTAACTGGTGGTATTCCATGTAACTTCTGCCTCACGGGTTCAAAGCTTCAGCAACTGTTCTTGGCTAGGAATAAGCTTTCTGGAAAATTCCCCTTGGAGCTACTCAACTGCTCCTCAATCCAACAGGTGGACCTTTCTGACAACATCTTTGAAGGTGAACTTCCATCCAACCTTGACAAACTTCAGAACCTAACAGATCTTGTGCTCAACAACAACAGCTTCGTTGGATCTATACCTCCAGAAATTGGAAATATAAGTAGCTTAAAAAGCCTTTTCTTGTTTGGTAACTTCTTCACAGGAAAAATCCCAGTGGAGATTGGAAGGCTTAAGAGGTTGAATACCATTTACCTCTATGATAACCAGATGTGTGGACCTATACCAAGAGAGTTAACAAACTGCACAAGATTAACTGAAATTGACTTCTTTGGAAACCATTTTTCTGGCCCCATTCCAGAGACTATAGGTAAGTTAAAGGACTTAACTGTTCTCCATTTAAGGCAGAATGACTTGTCAGGTCCAATCCCACCAAGCATGGGCTACTGTAAAAGGCTTCAGTTATTGGCATTAGCAGATAACAAGTTGTCAGGTTCAATACCACCCACATTTAGTTACCTTTCAGAAATTAGTACCATTACCCTTTACAACAACTCTTTTGAAGGACCTTTACCTGATTCTCTTTCTCTTCTCAGAAACCTTAAAATCATAAACTTTTCCAATAACAAGTTCAGTGGAAGTATCTTCCCTCTAACTGGTTCAAATTCTCTTACTGTTTTGGACTTAACAAACAACACCTTCTCAGGTCCTATCCCTTCTATTCTAGCCAGCTCCAGAGATCTCATTCGTCTCAGACTTGCACACAACTATCTCACAGGAACCATTCCTTCTGGGCTTGGCCATCTCGCTGAGCTAAACTTCCTTGATTTATCATTCAACAACTTGACAGGAAATGTGCCACCTCAACTCTCTCAGTGCAAGAAAATTGAACACCTTCTGCTGAATAATAACAGATTGAGTGGAGAAATGTCTTCATGGTTGGGAAGCTTGCAAGAACTTGGAGAGCTAGATCTCTCATTCAACAACTTCCATGGAAAGGTTCCTTCTGAGCTTGGTGGCTGCTCAAAATTGCTTAAGCTTTCTCTCCATCACAACAATCTCTCAGGTGAAATCCCACAAGAGATAGGAAATCTCACATCTCTCAATGTCTTCAACTTGCAAAGGAATAGTCTATCTGGCCTCATTCCATCAACAATTCAGCAATGCACTAAGCTTTATGAGTTAAGGCTCTCAGAGAACTTCCTCACAGGAACTATACCAATTGAGCTAGGGGTGGTCACTGAGTTGCAAGTGATATTGGACTTGAGTAGAAACCTCTTATCTGGTGAGATTCCATCATCTCTTGGAAATCTCATGAAGCTAGAAAGACTTGATCTTTCTTTTAATCAACTTCAAGGAGAAGTTCCTCCTTCACTTGGTCAACTGACAAGCCTGCATGTGCTAAATCTCTCAAATAACCATCTTCATGGCTTCATTCCTTCAACCTTTTCAGGGTTCCCACTAAGCTCATTCCTTAATAATGACCATTTATGTGGCCTGCCACTAGCATTTTGCTCAGAAGCTATGAGGAAAGAGAAAATGCAGCTTTCAAATACACAAGTGGCAGCAATCATAGCTGCTATTGTTCTTACTTCTACTCTGATATGCTTAGTAATGTTCTATATAATGTTGAGAATCTGGTGCAACTGGATAAAGGTAGCTGTTTCAAGTGAAGATGATGGCATGCTTGAGCAGAAGCCAAGAAAGGGAGAGTACTGGAATGTGAATTCCTCTGGGTTGTTTCCTTCACCAGAGAAGCAGAATATAGTAACAACTTGCATTTATAATCTTAAAATTGATGCAGAAGCCATGGAAAATAGCTTGGTCTGA 2886 0.3957 MDSICMCHFILLLTIVCTFVVATLGDNTTDSYWLLRIKSELVNPFGAMSNWSPTTHICSWNGLTCANDQTHIIGLNLSGSGISGSISVEFSYLISLQTLDLSSNSITGSIPSEIGQLQNLRILLLYSNYLSGNIPAEIGNLNKLQVLRLGDNMLTGEITPSIGNLGELTVLGLANCNLNGSIPVEMGNLKHLTSLDLQVNSISGLIPEEIQGCEELQNFAASNNMLEGEIPFSIGSLRSLRILNLANNSLSGSIPTSLSDLSNLTYLNLLGNKLNGEIPSDINNLSQLQKLDMSKNNLSGSLTLLNTKLLNLETLVLSDNALTGGIPCNFCLTGSKLQQLFLARNKLSGKFPLELLNCSSIQQVDLSDNIFEGELPSNLDKLQNLTDLVLNNNSFVGSIPPEIGNISSLKSLFLFGNFFTGKIPVEIGRLKRLNTIYLYDNQMCGPIPRELTNCTRLTEIDFFGNHFSGPIPETIGKLKDLTVLHLRQNDLSGPIPPSMGYCKRLQLLALADNKLSGSIPPTFSYLSEISTITLYNNSFEGPLPDSLSLLRNLKIINFSNNKFSGSIFPLTGSNSLTVLDLTNNTFSGPIPSILASSRDLIRLRLAHNYLTGTIPSGLGHLAELNFLDLSFNNLTGNVPPQLSQCKKIEHLLLNNNRLSGEMSSWLGSLQELGELDLSFNNFHGKVPSELGGCSKLLKLSLHHNNLSGEIPQEIGNLTSLNVFNLQRNSLSGLIPSTIQQCTKLYELRLSENFLTGTIPIELGVVTELQVILDLSRNLLSGEIPSSLGNLMKLERLDLSFNQLQGEVPPSLGQLTSLHVLNLSNNHLHGFIPSTFSGFPLSSFLNNDHLCGLPLAFCSEAMRKEKMQLSNTQVAAIIAAIVLTSTLICLVMFYIMLRIWCNWIKVAVSSEDDGMLEQKPRKGEYWNVNSSGLFPSPEKQNIVTTCIYNLKIDAEAMENSLV* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0794 961 Gene3D Ribonuclease Inhibitor 527 866 IPR032675 -
Apr1g0794 961 Gene3D Ribonuclease Inhibitor 87 306 IPR032675 -
Apr1g0794 961 Gene3D Ribonuclease Inhibitor 23 86 IPR032675 -
Apr1g0794 961 SUPERFAMILY L domain-like 53 372 - -
Apr1g0794 961 SUPERFAMILY RNI-like 374 707 - -
Apr1g0794 961 Gene3D Ribonuclease Inhibitor 307 526 IPR032675 -
Apr1g0794 961 Pfam Leucine Rich Repeat 95 115 IPR001611 GO:0005515
Apr1g0794 961 Pfam Leucine Rich Repeat 239 259 IPR001611 GO:0005515
Apr1g0794 961 SUPERFAMILY RNI-like 653 845 - -
Apr1g0794 961 ProSiteProfiles Leucine-rich repeat profile. 95 117 IPR001611 GO:0005515
Apr1g0794 961 PANTHER - 1 448 - -
Apr1g0794 961 PANTHER - 635 956 - -
Apr1g0794 961 PANTHER - 444 661 - -
Apr1g0794 961 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 448 - -
Apr1g0794 961 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 635 956 - -
Apr1g0794 961 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 444 661 - -
Apr1g0794 961 Pfam Leucine Rich repeats (2 copies) 792 825 IPR025875 -
Apr1g0794 961 SMART LRR_typ_2 141 165 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 93 117 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 478 502 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 189 212 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 717 740 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 237 261 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 382 406 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 285 308 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 669 693 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 790 813 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 814 837 IPR003591 -
Apr1g0794 961 SMART LRR_typ_2 621 645 IPR003591 -
Apr1g0794 961 PRINTS Leucine-rich repeat signature 288 301 - -
Apr1g0794 961 PRINTS Leucine-rich repeat signature 814 827 - -
Apr1g0794 961 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0794 Apr-Chr1 9773554 9776439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0794 166 877 Receptor kinase-like Gene Family AT5G46330 34.631 3.30e-109 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0794 - - gmx:100802757 1580.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0794 1 9773554 9776439 Apr1g0794 1 9773554 9776439 ECH
Apr9g3120 9 38008425 38012006 Apr1g0794 1 9773554 9776439 PCT