Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3113 ATGCAATCGTTATGGTTAAGTATGAGGGTGAGTGTGGGTGTGAGTGTGAGTGTGAGGAGTGCTTCAGCGAGGGTGAGGAGGAGTGCCATCGTAGCGTCTTCTTCGGAGGGAGAAAATCGTAGCACCAGTTCCTTTCTCTCTCGGACACAAACCTACGCTCTCCTCAAACAACAATTGCAAGTAGCTGCTAAATCTGAGGATTACAAGGAAGCAGCTAGAATTCGAGACTCGTTAAAGTTATTTGAGGACGAAGAACCCGTTTTGCGTCTCAGGAGATTAATGAAGGAAGCAATTGCTGATGAGAGATTTCAGGATGCAGCTAGCTATCGCGATGAGCTAAAAAAGATTGCCCCACACTCCCTTTTAAAATGTTCCAGTGATGCTACAACATTGGGAATCAGGGTTCAAGTTAGGAGTGTGTATATAGAGGGCAGAAGTCAGCCTTCAAAGGGGCTTTACTTCTTTGCATATAGAATTAGAATTACCAATAACTCAGACCACCCTGTTCAACTTCTTAGAAGACATTGGATTGTAACCGATGCTAATGGGAGAATGGAAAATGTCTGGGGGATTGGGGTTGTAGGTGAACAGCCAGTAATACTTCCCAGGAATAGTTTTGAATACTCTTCAGCATGCCCATTGAGCACACCAAATGGTAGAATGGAAGGTGACTTTGAGATGATCCATGTTGATAGAGTAGGTTCACGATCATTCAATGTGGCCATTGCCCCGTTTTCCCTCTCTCTGCTTGGAGATGATGATGGTCATATTATTTGA 777 0.4414 MQSLWLSMRVSVGVSVSVRSASARVRRSAIVASSSEGENRSTSSFLSRTQTYALLKQQLQVAAKSEDYKEAARIRDSLKLFEDEEPVLRLRRLMKEAIADERFQDAASYRDELKKIAPHSLLKCSSDATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDHPVQLLRRHWIVTDANGRMENVWGIGVVGEQPVILPRNSFEYSSACPLSTPNGRMEGDFEMIHVDRVGSRSFNVAIAPFSLSLLGDDDGHII* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3113 258 Pfam UvrB/uvrC motif 89 116 IPR001943 GO:0005515
Apr9g3113 258 Pfam UvrB/uvrC motif 55 82 IPR001943 GO:0005515
Apr9g3113 258 Pfam ApaG domain 145 228 IPR007474 -
Apr9g3113 258 ProSiteProfiles ApaG domain profile. 127 254 IPR007474 -
Apr9g3113 258 PANTHER OS05G0170800 PROTEIN 26 254 - -
Apr9g3113 258 ProSiteProfiles UVR domain profile. 84 119 IPR001943 GO:0005515
Apr9g3113 258 ProSiteProfiles UVR domain profile. 49 84 IPR001943 GO:0005515
Apr9g3113 258 Gene3D ApaG domain 123 255 IPR036767 -
Apr9g3113 258 SUPERFAMILY ApaG-like 129 248 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3113 Apr-Chr9 37946551 37950134 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3113 - K06195 gmx:100782176 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g3113 9 37946551 37950134 Apr9g3113 9 37946551 37950134 ECH
Apr9g3113 9 37946551 37950134 Apr1g0804 1 10060661 10064100 PCT