Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3105 ATGGCACACACCACTAACACTTCTATTCACAGGTCGAGTTCACGGCCTCAATTGGATCTCAGCAAAGCAGAAATTCAAGGAAACGTCGAGGAGAAATATCCAACTATTTTGTTGCCCAATCAATCTCATGATTTATTTCACCTAGCTCTTGACATTGGAGGATCTCTTATAAAGTTAGTGTACTTTTCAAGACACCACGACCAATCAACTAATGACAAGAGGATGGAAAATGTGAAGAATCGACTGGGATTTCCCAATGGTAACAGGAGAAGCTATCCTATTCTTGGCGGAAGGCTTCATTTTGTGAAGTTTGAGACTAGCAAGATTAACGAGTGCTTAGATTTCATTTATTCAAAGCAGCTTCACTGTGGAGGGGAATCACATTATTCCGACACTGTGACTGATCGGAATGCCATAATTAAGGCTACTGGTGGTGGAGCATTCAAATATTCGGAGCTTTTCAAAGAAAGACTTGGGCTTAGTCTTGACAAAGAAGATGAAATGGGTTGTCTTGTAGCAGGAGCAAATTTTTTGCTTAAGGCAATTCGTCATGAAGCTTTTACACACATGGAGGGCCAGAAAGAGTTTGTTCAAATAGACCCTAATGATTTGTTTCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGAAAATTTGAGAGGGTTAGCGGGACAAATGTTGGTGGTGGTACTTATTGGGGTTTGGGAAGGCTGTTAACAAAGTGTGAGAGCTTTGATGAGTTACTTGAGCTGAGTCAGAAAGGAGATAATAGCAACACTGACATGCTTGTTGGGGACATTTATGGTGGCATGGACTATTCTAAGATTGGCCTGTCGGCTTCTACCATTGCTTCAAGTTTTGGCAAGGCTACATCAGAGAAAAAGGAGCTTGAAGATTATAAACCTGAAGATATATCACTCTCTCTTCTGCGAATGATTTCATATAATATTGCCCAGATATCTTACTTGAATGCACTACGATTTGGGTTGAAGCGAATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGATGCTATTTCTTTTGCAATTCATTTCTGGTCTAAAGGGGATGCACAAGCAATGTTTTTGCGACATGAAGGTTTTCTGGGAGCATTAGGTGCATTTATGAGCTATGAAAAGCACGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGGTTCCCAATGGGTGCTCCATATACAGGAGGCAAGATTCACGGTCCCCCACTTAGGGATTTGAATGAAAAGATTTCGTGGATGGAGAAGTTTTTACAGAAGGGAACCGAGATCACCGCCCCTGTGCCAATGGCTCCTCCTGGAACAACTGGACTTGGAGGTTTTGAAGTTCCTTTGTCCAAAGGAAGTACTCTGCGATCTGATGCTAGTGCTCTAAATGTTGGTGTCCTCCATCTAGTGCCTACTTTAGAAGTGTTTCCATTATTAGCAGACCCAAAAATGTATGAGCCTAATACTATTGATCTCTCAGATCACAGTGAATTGGAGTATTGGCTCAAGATTTTGTCAGAGCACTTGCCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGGACTGATGACGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCTCACCTGGCTAGGGAAAATGAGGCATCACTTGCTGTCTTACCTGATCTGTTGATGGAACTTGATAGTCTGGATGAGGAAACAAGACTACTTACTCTAATTGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCGGAGACCTTGGCGAGTGGATGATTTTGATGCTTTTAAAGAGAGAATGATAGGGACTGGGGACAAGAAACCAGCCCAACATAGAAGAGCTTTACTTTTTGTGGATAATGCAGGTGCTGACATTGTTCTAGGGATGCTTCCCCTGGCACGAGAGCTCCTTCGTCGTGGAACTGAAGTGGTCCTGGTTGCAAACTCCCTTCCTGCTTTGAATGATGTGACTGCAATGGAGCTTCCTGATATTGTTGCTGAGGCTGCCAAGCACTGTGACATTCTTAGGCGAGCTGCTGAATCTGGAGGATTGCTTGTGGATGCAATGACTAATACCTTAGACAGTTCTAAGGAAAAATTTTCTTCTGTTCCATTGATGGTTGTTGAGAATGGGTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTGGCTGCTGCTGCAAAAAATGCCGATTTGATAATTTTGGAAGGGATGGGGAGAGCTCTTCATACCAACCTTAATGCCCAGTTTCAATGTGATGCTTTGAAGCTTGCAATGGTGAAAAACCAGAGATTGGCTGAAAAGTTAATTAAAGGGAACTTATACGACTGTATTTGCAAGTACGAGCCTGCTAACTGA 2484 0.4227 MAHTTNTSIHRSSSRPQLDLSKAEIQGNVEEKYPTILLPNQSHDLFHLALDIGGSLIKLVYFSRHHDQSTNDKRMENVKNRLGFPNGNRRSYPILGGRLHFVKFETSKINECLDFIYSKQLHCGGESHYSDTVTDRNAIIKATGGGAFKYSELFKERLGLSLDKEDEMGCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCESFDELLELSQKGDNSNTDMLVGDIYGGMDYSKIGLSASTIASSFGKATSEKKELEDYKPEDISLSLLRMISYNIAQISYLNALRFGLKRIFFGGFFIRGHAYTMDAISFAIHFWSKGDAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLRDLNEKISWMEKFLQKGTEITAPVPMAPPGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKMYEPNTIDLSDHSELEYWLKILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARENEASLAVLPDLLMELDSLDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDAFKERMIGTGDKKPAQHRRALLFVDNAGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAESGGLLVDAMTNTLDSSKEKFSSVPLMVVENGCGSPCIDLRQVSSELAAAAKNADLIILEGMGRALHTNLNAQFQCDALKLAMVKNQRLAEKLIKGNLYDCICKYEPAN* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3105 827 PANTHER PANTOTHENATE KINASE 558 749 IPR004567 GO:0004594|GO:0005524|GO:0015937
Apr9g3105 827 PANTHER PANTOTHENATE KINASE 6 558 IPR004567 GO:0004594|GO:0005524|GO:0015937
Apr9g3105 827 MobiDBLite consensus disorder prediction 1 20 - -
Apr9g3105 827 SUPERFAMILY Actin-like ATPase domain 46 185 IPR043129 -
Apr9g3105 827 PIRSF PanK_long 1 558 IPR015844 GO:0004594|GO:0015937
Apr9g3105 827 PIRSF PanK_long 556 827 IPR015844 GO:0004594|GO:0015937
Apr9g3105 827 SUPERFAMILY AF1104-like 482 825 IPR036075 -
Apr9g3105 827 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 628 825 - -
Apr9g3105 827 Pfam Fumble 47 388 IPR004567 GO:0004594|GO:0005524|GO:0015937
Apr9g3105 827 Pfam Damage-control phosphatase ARMT1-like domain 557 813 IPR002791 -
Apr9g3105 827 Gene3D - 40 198 - -
Apr9g3105 827 PANTHER PANTOTHENATE KINASE 2 558 749 - -
Apr9g3105 827 PANTHER PANTOTHENATE KINASE 2 6 558 - -
Apr9g3105 827 TIGRFAM panK_eukar: pantothenate kinase 47 389 IPR004567 GO:0004594|GO:0005524|GO:0015937
Apr9g3105 827 Gene3D - 267 379 - -
Apr9g3105 827 SUPERFAMILY Actin-like ATPase domain 157 390 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3105 Apr-Chr9 37865078 37877292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3105 K24265 K09680 gmx:100783082 1504.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0812 1 10192528 10205375 Apr9g3105 9 37865078 37877292 ECH
Apr9g3105 9 37865078 37877292 Apr9g3105 9 37865078 37877292 ECH
Apr9g3105 9 37865078 37877292 Apr1g0812 1 10192528 10205375 PCT